Pecten maximus (king scallop): 117321386
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Entry
117321386 CDS
T07399
Name
(RefSeq) ATP-dependent DNA helicase Q1-like
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117321386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117321386
03400 DNA repair and recombination proteins [BR:
pmax03400
]
117321386
Enzymes [BR:
pmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117321386
Messenger RNA biogenesis [BR:
pmax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
117321386
DNA repair and recombination proteins [BR:
pmax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
117321386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
117321386
NCBI-ProteinID:
XP_033731720
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MADFSTCLEFAKAKLKLDYDLKDKQIDTLRNVFIGSDCVSVLPTGYGKSVIFQLLPFLLQ
RKRQLQTPAIVIVVTPLSSIMEDQVYSLRDKGIKACFLNIDGKHASTYTDDKVSDDDDDD
DDDSCDIKLPKSVSMNDIKRGNYNLIYAHPETLINSKTCSSILRSSVYQANVGAVVIDEV
HMITEWGENFRPAFKKLGETTCIFPEAAHLALTATATPKKINELCKILQYQQPQVVTVNP
DRPNIFLNIEKRLPNLHKFEKLDKIIEPIADGLKTQLGIFPVTIVYMESLEALSYCYQYI
SYCLQELQYSGEQLPENRIFGQYHKDYTDDMKRHIVTELTKENPKIRLVLATVALGMGLN
APSISQIIHCRPPTTIECYMQEIGRAGRNGQPASALLYYNNSDISKARKGMSDEMINYCK
NETSCSRTFLVQYFGFEQVLFNKSPVECCSNCKKLIWD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttttccacgtgtttggagttcgcaaaagcgaaactgaaactagattacgat
ctgaaggataaacagatagatacactcagaaacgtgtttatcgggtcagattgcgtgtct
gtacttcccacgggctatgggaaaagcgtcatctttcagttgttgccgtttttgttgcaa
cggaaacgtcaactgcaaacaccagcgatcgttatagttgtaacccctttaagctccatc
atggaagatcaggtgtacagtttaagagacaagggtatcaaagcatgctttttaaatatt
gatggaaaacatgcgtctacatacactgatgacaaagttagtgatgacgatgatgatgat
gacgatgattcatgtgatataaagttgcctaagtctgtgtccatgaatgacatcaagaga
ggaaattataatttgatatacgcacatccggagacgttaatcaatagtaagacatgttcc
tctattctccgatcttccgtgtaccaggcaaacgtgggggcagttgtaatcgacgaggta
catatgattacagaatggggagagaatttcagacccgcttttaaaaaactgggtgaaaca
acatgcattttcccagaggctgcacacctggcacttaccgccacagcaacaccaaagaaa
ataaacgaactatgtaaaatattacaataccagcagcctcaggtggtcactgtcaatccc
gacagaccaaacatctttttaaatattgaaaaaaggctaccaaatctccacaaatttgaa
aaattggacaaaataattgaacctattgccgacggactgaagactcaattaggaatcttt
cctgtaacaattgtgtatatggagagcttagaagctctcagttactgttatcagtatata
tcgtactgccttcaggagttacaatacagtggtgaacaacttcctgagaaccggatcttc
ggtcagtaccacaaagactacactgacgatatgaaaagacacatagtcactgaacttaca
aaggaaaatcctaaaattagactcgttctggccacagttgcattaggtatgggtttaaat
gcaccgtcaatatcacagatcattcactgtagaccaccaactaccattgaatgctatatg
caggaaatcggccgtgctgggagaaatggtcagccagctagtgcccttctttactacaac
aacagtgacatttcaaaggctcgaaaaggcatgtctgacgaaatgataaactattgtaaa
aatgaaacctcatgttctcgtacatttttggtgcagtattttgggtttgaacaagtgctt
ttcaacaaatcacctgttgaatgttgttcaaactgtaaaaagctgatatgggactga
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