Pecten maximus (king scallop): 117321555
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Entry
117321555 CDS
T07399
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117321555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmax04121
]
117321555
Enzymes [BR:
pmax01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117321555
Ubiquitin system [BR:
pmax04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117321555
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117321555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
zf-C3HC4_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
zf-C3HC4
zf-RING_2
zf-RING_UBOX
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_Vps41
zf-C3HC4_3
Beta-prop_WDR75_1st
WD40_like
Beta-prop_WDR35_TULP_N
zf-C3HC4_4
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD40_RFWD3
zf-RING_5
Beta-prop_HPS5
RING_XB3-XBAT31
WD40_MABP1-WDR62_1st
zf-RING_10
zf-rbx1
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_WDR11_2nd
Sina_RING
zf-RING_6
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
117321555
NCBI-ProteinID:
XP_033731895
LinkDB
All DBs
Position
2:complement(23433619..23456884)
Genome browser
AA seq
618 aa
AA seq
DB search
MTARTPQTGRRRKRQQPPVYSGISGSYEDKDNDYVCPICFDLLEEAHMTKCGHTFCYKCI
KQSLEQSNRCPKCNFVIDSVQQLFPNFTVNELVLKHRGRQDEKKMKIDQQNSPGTGSDLC
DLVTEDSLDLPHVNQLLSLLHHKKQLLEADGTLAQNLILKEFLQQIHVKKQEHIDQLTRE
LAVIDEDTKKVEMMISEHRRKYPFTPDHLVPNGFDPSISTSSDMGSQEGFNGSKNAGKWL
STTMAARKKKVSQHFDDLEQCYFSVRQREILTGGENKDGLGEFTESLSKFTRFSTFRPLA
TLSYASDFYSGSSIVSSIEFDRDCDYFAIAGVTKRIKVFEYCNVIKDVVDIHYPVNEMVC
NSKISCVTWSAYHKNMLASSDYEGTITLWDAFSGQKSKIFQEHEKRCWSVDFNRMDPKLL
ASGSDDAKVKLWSTNAEHSIASLEAKANVCCVKFNPESRYHLAFGSADHCVHYYDLRNTK
QAVMIFKGHRKAVSYTKFLNTKEIVSASTDSQLKLWNIKKPTNLQTFKGHINEKNFVGLA
TDGDYVACGSENNSLYVYYKGLSKQLLTFKFDTVRSALEKDKKEEEINEFVSAVAWRPGS
NVIVAANSQGTVKVLELV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaagaacgccacagactggtcggagaagaaagcgacaacaaccgccagtatac
agtggaataagtgggtcgtacgaagacaaagacaacgattatgtctgtccaatttgtttt
gacctgttagaagaggctcatatgacgaaatgtggccacacattctgctacaagtgcatc
aaacagagcctggaacagagcaatagatgtccaaagtgtaactttgtcattgacagtgtc
cagcagctctttcctaatttcactgtaaatgaactggtgctgaaacacaggggaagacag
gatgaaaagaagatgaaaattgaccaacagaactcacctggaactggctcagatctctgt
gaccttgtgaccgaggacagccttgatcttccccatgtcaaccagctactgtcattatta
caccacaaaaaacagctgttagaggcggatggtacattagcacaaaatttaattttgaaa
gaatttttacaacaaatccatgttaaaaaacaagagcacatagaccagttaaccagagaa
cttgctgtgatagatgaagacaccaaaaaagtagagatgatgatctcagaacacagaagg
aaatatccctttaccccagatcatctggtgcccaatgggtttgatccctccatttccacc
agttctgacatgggcagtcaagaaggttttaatggcagtaaaaacgccggcaagtggtta
agtacaactatggcagctagaaagaagaaggtcagccaacactttgatgatctggagcag
tgttacttctctgtgagacagagggagatactgactggtggagaaaataaagatggattg
ggagagtttacagaaagcctttcaaagttcaccagatttagtacatttaggccgctagcc
actctcagctatgccagtgacttctacagtgggtccagtatagtatcaagtattgagttt
gacagagactgtgactattttgccatagcgggtgttacaaaacgtatcaaggtgtttgaa
tactgcaatgttataaaagatgtggttgatattcattacccggtgaatgagatggtgtgc
aactccaaaataagttgtgtgacttggagtgcataccacaagaacatgctggccagttct
gactatgagggcactatcaccctgtgggacgctttctcaggccaaaagtcaaagattttt
caggagcacgaaaagcgttgctggagtgttgatttcaaccgaatggatcccaagcttcta
gcatctggatcagatgatgccaaagttaagctgtggtcaactaatgctgaacactctata
gccagtctagaggcgaaagccaatgtatgttgtgtcaagttcaaccccgagagtcgttac
catctggcttttggttccgcagatcattgtgtacactactatgacttacggaacaccaaa
caggctgtgatgatctttaaaggtcacagaaaagctgtgtcctacacaaaatttttaaac
accaaagaaatagtatcagcatccacggacagccaacttaaattatggaatattaaaaag
cctacaaacttacagacttttaagggacacataaacgaaaaaaactttgttggtttagca
acagatggagactatgtcgcctgtggaagcgagaacaattccttgtatgtttattataag
ggcttgtctaaacaactgctcacatttaagtttgacacagtccgcagtgctttggagaag
gataagaaagaagaagaaatcaacgaatttgttagtgctgttgcctggcgaccaggctcc
aatgtgatagtagcagctaacagtcaaggaacagtcaaagtgctagagttggtgtga
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