Pecten maximus (king scallop): 117321765
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Entry
117321765 CDS
T07399
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117321765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmax03021
]
117321765
03036 Chromosome and associated proteins [BR:
pmax03036
]
117321765
Transcription machinery [BR:
pmax03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117321765
Chromosome and associated proteins [BR:
pmax03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117321765
PBAF complex
117321765
GBAF(ncBAF) complex
117321765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
117321765
NCBI-ProteinID:
XP_033732174
LinkDB
All DBs
Position
2:30718424..30740781
Genome browser
AA seq
1110 aa
AA seq
DB search
MAVQRKKDGSPNVKFYEAVETIAQFDSVRTWLHKNCKKYTQADPPTNKSLANLVIQLLQF
QEDAFGKSVSNSALTKLPMKCFLDFKAGGALCHIIAAVYKFKSDQGWRRFDFQSPSRMDR
NVEMFLQIEKSLVQNKCLTMPCIFLQPDIDKSLMPKLRDIIKRHQGTLAEDPEDATHIIH
PLPSSSDKDEEWIRPVMKRDRHALIHWWYLPDSYDTWALDVHVEDDPPEKSHHGPWEVTA
RWLLDLEEYNEWMNEEDYAEEEFETKRSKKTKIIKMTVDDLVPSQDSDRREKRDKKTKRK
RSPSPPIIEKKKRKSGRTSTAPGSTKKKSTRDEDDEDLTKDMDNPSPETNIQEVQLSKQP
SSSRSTKDSENMPIKGGTVMDLDEETNDKFPEGEGKVESVETQEEVPKDKEEEEDNVTEQ
THHIIIPSYSAWFDYNGIHSIEKRALPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLLNYQVDADNKPSAMGPPPTSHFHIMADTPSG
LAPANPPKINQPSAAKQIVSFDGDKDKERDGDDKKELSNFSLRMDIYAKKALKDKGAATR
SREWTDQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPFLEEDFGHLG
PLAFQPIPFSQSGNPIMSTVAFIASVVDPRVASAAAKAALEEFAKMKDEVPPALTHAHVK
MVEEAVKEGKPVDAVFGLEKSGIAGTVAEKEEPKEETDKVEEKKESEDKEKDEDSKSEGK
KEEGKEDEEEKDKEKTEEAMETEEAEKKDEKSEKDDKSKDKETTKETESEEKKDEKKTDE
EKEKTGEEEKMDTKEGEEEKSKEGTDEKKEEEMKVEMSKRKADGNVATAAASALASAAVK
AKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRERDALEFQRQQLLQERQ
MFHNEQIRAAEHRARQIAMQQLVSEQKQQSAQQAGEQGGSAGSGGVPVSTPSLAAAVGQS
YPMTGSPMAPQGPQAHQPAQGSPAPSFPTPSQSQSPQPPPQTLTQGLPPQSMHLPATPTK
PSSVESPAPSTQSDSEPMVTDSPSPAVPKP
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggcggtccaaagaaagaaagacggttctcctaatgttaaattttatgaggccgtggaa
acgatagcacagttcgattcggtccgaacatggcttcacaaaaattgcaaaaagtatacg
caagcagatccaccgaccaataaaagtttggccaaccttgttatccagctgttgcagttc
caagaagatgcatttggaaaatcagtcagcaattctgcactcacaaaattacctatgaaa
tgcttcttagatttcaaagctggaggagctttgtgccatatcattgctgctgtttataaa
ttcaaaagtgatcaaggatggagaagattcgatttccagtcaccatcacgaatggacagg
aatgtggagatgttcctacagatagagaagtcccttgtccaaaacaaatgtctgacaatg
ccgtgtatattccttcagccagacattgataaatctcttatgccaaagttgagggacatt
ataaaacgtcaccaagggacactggccgaagatccagaggatgctactcatatcattcat
cctctgccctctagtagtgataaggacgaagagtggatccgtccagtgatgaaaagagac
agacacgccctcatacactggtggtatttaccagacagttatgacacctgggcattggat
gtccatgtcgaggatgaccctccggagaagtctcaccatggaccatgggaggtaactgcc
agatggcttttggatctagaagaatacaatgagtggatgaatgaagaggattatgcagag
gaagagtttgaaacaaaaagaagcaagaaaacaaagataatcaagatgacagttgatgat
ctggttcccagccaggatagtgacaggcgggaaaaaagggacaaaaagaccaagagaaaa
cgatcaccttcgccaccaattatagaaaagaagaaacgcaagagtgggcgtacctccact
gcacctgggtcaacaaagaagaagagcacaagagatgaggatgatgaggatttaaccaag
gacatggataatccatcacctgaaaccaacattcaggaagtccaactatccaaacaacct
agcagctcgcgaagtaccaaagactcagagaatatgcccatcaaaggtggtaccgtaatg
gacctagatgaggagaccaatgacaagttccctgagggtgagggtaaggttgagtcagtg
gaaacccaagaggaggtgccgaaagacaaggaagaagaggaagacaatgtgacggaacag
acccaccacatcatcattccaagctactctgcctggtttgattacaatggtattcactcc
atagagaagagagctttgcccgagttcttcaatagcaagaacaagtcaaaaacgccagaa
atatacatggcttaccgtaactttatgatagacacataccgtcttaaccccaccgagtac
ctcaccagtacggcctgtaggagaaatctggctggtgacgtgtgtgcaataatgagagtc
cacgccttcctagaacaatggggtctactcaactaccaggtggacgctgacaacaagcca
tcagccatgggacctccaccaacctcacatttccacatcatggctgacacaccatcaggc
ctggccccagcaaacccaccaaagatcaaccagccatcagcagccaaacagatagtcagt
tttgatggagataaggacaaggagcgagatggagatgataagaaggagttgtctaacttc
agtctcaggatggacatatacgctaaaaaggcactgaaggacaaaggcgctgcaacccgt
tcccgtgagtggacagatcaggagactctcctgttactggaggccctggagatgtataag
gatgactggaacaaagtctccgaacatgttggtagccgcacccaggatgagtgtatcctt
cactttctcagacttcctattgaggaccccttccttgaggaagattttggacatctcgga
cccttggcattccagcccataccattctcccaaagtggcaaccccatcatgtccaccgtg
gcctttattgcctccgttgttgacccacgtgtggccagtgctgcagccaaggctgctcta
gaggagttcgcaaagatgaaggacgaagttcccccagctttaacacatgcccatgtcaag
atggtggaggaggcagtgaaggagggcaagcctgtggatgctgtttttggtctggaaaag
agcggcatcgctggtactgttgctgagaaggaggagcctaaagaagaaacggacaaagta
gaagagaagaaagaatctgaagacaaagaaaaagatgaggattcaaagtctgaaggcaag
aaagaagagggaaaggaagatgaggaagagaaagacaaagaaaagactgaagaagcaatg
gaaacagaggaggcagagaaaaaggatgagaagtcagagaaagatgacaagtcaaaagat
aaagaaactacgaaagaaaccgaatcagaggaaaagaaagatgagaaaaagaccgatgaa
gagaaggaaaaaactggtgaagaagaaaaaatggatacaaaggaaggagaggaggaaaaa
tcaaaggagggcacagatgagaagaaagaggaagaaatgaaagtggagatgtcaaagagg
aaggccgatggcaatgtagctacggcagcagcatctgcactggcatcagcagcagtcaag
gctaagcatttagcagcagtggaggagcgtaagatcaaatccctggtggcactgttagtg
gagactcaaatgaagaagctggagatcaagctacgtcactttgaggagttagagaccatc
atggatagggaaagagatgcactggagttccagcgtcagcagttgttacaagagagacag
atgttccacaatgaacaaattcgtgcagctgaacaccgggcccgacaaatcgccatgcag
cagcttgtgtcggagcagaaacagcagtctgctcaacaggctggcgaacaaggaggctca
gcaggttctggaggcgtgccagtgtccacaccatctctcgctgcagctgtcggccagagc
tacccaatgactggctccccaatggcaccccagggcccacaggctcaccaacctgcacaa
ggatcccctgccccctcattccctacaccatcacagagccaaagtccacagccaccacct
cagacactcacccagggacttcccccacagagcatgcatctccccgccacccctacaaaa
cccagcagtgtggaatctccggcaccgtcgacacaaagtgattcagaacccatggtaacc
gactctccgtctcctgccgtaccaaaaccttga
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