Pecten maximus (king scallop): 117322068
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Entry
117322068 CDS
T07399
Name
(RefSeq) collagen alpha-5(IV) chain-like isoform X1
KO
K24526
RNA-binding protein 12
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmax03041
]
117322068
Spliceosome [BR:
pmax03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117322068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pentapeptide_2
Motif
Other DBs
NCBI-GeneID:
117322068
NCBI-ProteinID:
XP_033732691
LinkDB
All DBs
Position
2:40363707..40403395
Genome browser
AA seq
1159 aa
AA seq
DB search
MKKSLCKLLTITILLFLQEAHGQGDFFRNINPAGRFFGQRFGAGPNIPQNRQQPTQQQQQ
QQQTRQPQATNNAATATTGTSSASNTQPGNAQQVPRQVGTVTVPIIGPFPSDVGAQTPTG
MFGMGQQGSFSRMGQPMVPPQGMAPFGGRGGFNPMLAARQQQMQQQRQQQQQRPMFPFGQ
QNTMPPFPSQFGSSPQRGIDNLLLREGEQMLILPNSMAQTLMSMRNGNRRELRRLALLGI
PRSLLSTFAAQPEVFANLRRQTSNAGGARTSVVRRRNQQQVAPPEPAPRINFPQTLPPQV
QREMQMSGFGRMAGVSPRFGVMPSQPTQPIAPAINGSPTLSSAAGPAARPSLQQPQEQPQ
QPQQPQQPQQQRPIPGNQGLQMPPQVRGLFGQGRIPQEMIPPMFRGGMQGPMGGPMFPGA
PPVMPDMTGQQQPAQQNGQQQTAGQTANTPMTQNQPQQLPTQQQTMQGMQQNGMPPMGMP
NMGMFPMGMPNMGMPNMGMPNMGMPNMGMPNMGMPNMGMPNAGVPNMGMPNMNMQNMGMP
QNGQTNIPQMRPGVQQPFANGQQFGSPAMSGLPNQGGNMAANNAAPQTPMQPRRQATNQM
TTNPAMSQNGMPNGMNPGMPRQFPMPGMFPGNNFRGRMSGGMQGMPRMPGGMPGNMPGMS
AGMPGMQNMPSGMTGMPRGMPNGFQGMPGRMRGMQLPTGLPQQGARGAQLPTPGIPNLPD
NMPIPDLPGSPQQPSSASLPAPSFATPSAPGSGGLNRPVPSFPGIQPFPGMLPPITASAT
SAPPAPAGPAMPGRLGLPGPLALPGPLELPGPLELPGPLALPGPLELPGPLELPGPLEMP
GPLEMPGPLELPGPLELPGAANLPGPLALPGPIETSNPVEIPGPLPNPIGFPGPLDLSRP
LELPESSIPSNPFNGKPENKSENMSNLPGTDSSPVQVPTFPGLDLPGLPPSNGTGIPISL
QGRIGFAVADAGSPPPGPFPGPLPPPSPPPVMPFQEVPTSEQLGIEQPLIRPSPGSRSVF
SDTGSIGFIPAVTGGVPSEPVPSVAIAPQDPIPLDVPPPGTTGVLGVPVEGAPTQDSTMS
SVPQIPSQPAVSKTNIAEVVDPFPGLSFPSGPSLLGNPSFRTDIPNPADAIIQLTEIPSP
ADAILQGLPADDFAQPSVA
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatccctatgtaagctgcttactatcacgatattactctttctgcaagaagca
cacggccaaggagactttttcagaaacatcaacccggcaggtagattttttggacaacga
tttggggcgggacctaatattccacaaaatagacaacagccaactcaacagcagcaacaa
caacagcagacaaggcaaccacaggcaacaaataatgcagcaacggcaacaacagggaca
tcatcagcgtccaacactcaacccgggaacgcacagcaagtccctagacaagttggaaca
gtaacagttcccatcataggtcccttcccatctgatgtcggggcccagacaccaacagga
atgttcggcatgggacagcaaggttctttcagtcgtatgggacagccaatggtacctcca
cagggcatggcacctttcggagggcgtggtggattcaacccaatgctcgcggcgagacaa
cagcagatgcagcaacaaagacaacaacagcagcaacggcccatgtttccgtttggccaa
caaaataccatgcccccatttccatctcagtttggctcgtccccacaaagaggtatagac
aatctgttactgagggaaggggagcagatgctcattctaccaaatagcatggctcaaaca
ctgatgtcaatgcggaacggaaacagacgggaattgcgcaggctcgctttacttggtatt
ccacgctcgctccttagcacgtttgcagcacaaccagaggttttcgctaacttacgtaga
caaactagtaacgctggtggggccaggacttctgttgtacgacgaagaaatcaacaacag
gtagctcctccggagccagcacctagaataaattttcctcagacactccccccacaggtt
caacgagagatgcaaatgtcgggattcggaagaatggcaggtgtttctccgagatttgga
gtcatgccatcacaaccaactcaaccgatcgctccagctatcaatgggtctccaacgctc
tcatctgccgccgggcctgcagcgagaccatccctgcagcaaccacaagagcaaccacag
caaccacaacaacctcagcaacctcagcagcagaggccgataccaggcaaccagggccta
caaatgccacctcaagtgcgaggattatttggacaaggtagaataccacaagagatgatt
cccccaatgttcaggggtggcatgcaaggtccaatgggaggcccaatgtttccgggtgct
ccaccggtcatgccagatatgacaggacagcaacagccggcacaacaaaatggccaacag
caaactgcaggccagacagcaaatacaccaatgactcaaaatcagcctcagcagcttcct
acccaacagcaaacaatgcagggaatgcaacaaaatggaatgccacctatgggtatgcca
aatatgggtatgtttccgatgggcatgccaaatatgggaatgccaaatatggggatgcca
aatatgggaatgccgaatatgggaatgccgaacatgggcatgccaaatatgggaatgcct
aacgcaggcgtaccaaatatgggtatgcccaacatgaacatgcaaaatatgggcatgcca
cagaatggacaaaccaatattccccaaatgaggccaggagttcaacaacctttcgctaac
ggacaacagttcggatcccctgctatgtctggtttacctaatcagggtggaaacatggct
gcaaacaatgcagcgccacaaacaccgatgcaaccaagaaggcaagcaacaaaccaaatg
acgacaaacccagcaatgtcacaaaacggtatgccgaatggcatgaatcctggaatgccc
agacaattccccatgcctggcatgttcccaggtaacaacttcagaggcagaatgtcggga
ggaatgcaaggaatgccaagaatgccaggaggtatgcctggaaatatgccgggtatgtca
gcaggtatgccgggcatgcaaaatatgcctagtggaatgacagggatgccgagaggtatg
ccaaatggatttcaaggaatgcccggaaggatgcgaggaatgcaattaccgacgggatta
ccacaacagggagctaggggtgcccaactccctactcctggtataccaaatttaccagac
aacatgccgataccagatctacctggaagcccccagcagccttcatctgcgtccctacca
gcaccatcttttgctacaccatctgcgcctggttccggaggcctaaacagacccgtaccg
tcattccctggaatacagccattccccggtatgctacccccaataacagcttcagctacc
tctgctcctcctgcccctgctggcccggccatgccgggtcgtcttggattacccggaccc
cttgcattacctggaccccttgaattacccggaccccttgaattacccggaccccttgca
ttacctggaccccttgaattacccggaccacttgaattacctggaccccttgagatgcct
ggaccccttgagatgcctggaccccttgagttgcctggacccctcgagttaccaggggct
gctaatttaccaggtcccttggccctgccgggaccaatcgagacatcaaatcctgtcgaa
ataccaggtccccttccgaaccccattggatttccaggaccacttgatctttcacgccct
ctcgaactcccggagtcttcaattccctcaaacccattcaatgggaaaccggaaaataaa
tccgaaaatatgtccaacttacctggaacagattcctcaccagttcaagtgccaactttc
ccaggtttggatcttcccggactacccccttcgaatggtactggaatccctatttcctta
caaggaagaattggttttgccgttgccgacgcagggtccccgccaccaggccccttccct
ggtccactccctcccccttcccctccacccgtgatgccgttccaagaagtacctacctcc
gaacagctcggcattgagcaaccgttaattcgaccttcaccaggctcaagaagcgtcttc
agtgatactggaagcattgggtttataccggctgtcacaggtggtgtcccatctgagcct
gtgcccagtgtcgccattgctccacaggaccccataccactggatgttcccccgccaggc
accactggtgtgcttggagtgccagtagagggcgctcctacccaagattctactatgtct
tctgtcccacaaatcccctcacagcctgccgtcagcaaaaccaatattgctgaggtggtc
gaccctttcccaggactaagtttcccgtcaggccctagtctactcgggaatccctcattc
aggacagacattcctaatccagcagatgctattattcagctaacagagatccccagtcct
gcagatgctatactccaaggtctaccagcagacgattttgcccaaccgtcagtggcgtaa
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