KEGG   Pecten maximus (king scallop): 117322073
Entry
117322073         CDS       T07399                                 
Name
(RefSeq) LOW QUALITY PROTEIN: roquin-2-like
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
pmax  Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:pmax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pmax03000]
    117322073
   04121 Ubiquitin system [BR:pmax04121]
    117322073
Transcription factors [BR:pmax03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    117322073
Ubiquitin system [BR:pmax04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117322073
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-CCCH zf_CCCH_4 zf-RING_2 zf-C3HC4_3 zf-CCCH_4 zf-C3HC4 zf-C3HC4_4 zf-C3HC4_2 PaaA_PaaC Surface_Ag_2 Prok-RING_4
Other DBs
NCBI-GeneID: 117322073
NCBI-ProteinID: XP_033732704
LinkDB
Position
2:40485875..40515318
AA seq 1371 aa
MPVQTPAWTEFLSCPICYKVFDGKNLCPISLACSHTICKTCLSKLQQKKCPFDQNLINRS
IGELPVNYALLQLVGVVAAPNSDSNVSVPQEKISNYDSARNCIEALALYLKPLSTSVVPG
QVINNGSTQVTGVAGSSVTSTGSPLANCALSRPMQRKLVTLVNCQLVEEEGRGRAMRAAR
SLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEVLKLILLALEDGSALSR
KVLVMFVVQRLETHYPQASKTAIGHVVQLLYRASCFVVTKREEESSLMQLKEECRTYDAL
RRDHDSQIVQIAMEAGLRIAPDQWSSLLYGDTTHKSHMQSIIDKLQTPQSFSQSVNELVI
ALQRTGDPCNLQRLRTHLEFLANIDPSPEAPPPSWENLEAVMKAVRSVVQGLVDFVKNNG
HKKLENTTVHNSRYKTSMCRDFLQKNSCPRASNCTFAHSQEELDKYRSRTKKAGKACNTP
PEYEDCDRDDLQHMLTEVHQDNNRSNVESFNSAAQYDNRRNMSLPNVVTAKVLTSVAKSL
SSLTFAQAKVLTSDKMTESSETGPRMSSVVIPGMAPILPPPNTMQPPPTQVPRSPFPPDM
YQGQRTPAQLPHGPGVPAPSRPVFGGGGNVLTGSPSAGRPVFQSVPRFVTGPYRPQYNQA
LPQAQYPAGVPFRQPVDPGMPRMPFPPQQQQPPMGFMNYNYQHNSSVLNPYAEPFQGTGS
RPLTPEDQMYPVVGNYPEGFNYQPGTVLHGQGQAKILNDLRHRRAEILNRLFNPLDDFQT
NPEIPTYSNNASSQPDAGDMYGGGIHPNKTMLQGNRGVIQANSQTSHGARQDVVQMMAEQ
RGMTGNISEPGREGTESSAARHNAVQVNRKQVSCWQKDFNSSQSVTSSYQSASQTPGCDE
YKLVSHENNITSSEISSTRYLXFRRRDMGQTSNFGAQFYPEETNVSSSALHSMPGSTVSV
KKNISSQAYNNHEQAQNMTNLTSKGKLHSKSDPSRWRASHYSLMNRNRTFLTKNGHDREM
DSPKLHPDSFYASRQNLIGHASRNTSTISNPSDTQAALDTGCAVWSIDGIDDVVWNFTDT
QATSNQSNEKEDLLKEEQINSTEFMLNWLHDIPDEPTPIEPMDQFILPLSRALERSEEDA
IIPFDSTPMVSRFGPISRSARTKYKNTEPVQVTADDIMKKVTPVTAVTPLDHPKPTAKAQ
PSYVAPVVETTNSSGSVRWRRPSELENCVQRELNRLEQQALKADTENEFLACELKAVELQ
ISLQTEKTASQPVPETPILKPEIHPAVEMVAPVPIAVPVKTDTPHNPPGIWSSFELLKAA
YTRGQKVDELRELLKQVPMGVDQHIGTLTPQEEQFLKDVLGESPGSANLQT
NT seq 4116 nt   +upstreamnt  +downstreamnt
atgcctgtacagacacctgcttggacagaattcctttcctgtccaatatgttataaagtg
tttgacgggaagaacttatgtcccatcagccttgcttgctcacatacaatctgtaagact
tgtctatctaaactccaacagaagaaatgtccatttgaccagaatctcatcaacaggtcc
attggcgagctccctgtaaactatgccctgttacagttggtgggggtagttgcagccccg
aactctgacagtaatgtgtctgtgccgcaggaaaaaatcagcaattatgactcggcccgt
aactgcattgaggctctggctctatatcttaaaccactctctacaagtgttgtgccgggt
caggtgattaacaatggctccacacaggtgacgggtgtggctggttcctctgttaccagt
acaggaagtccccttgccaattgtgcgttgagcagacccatgcagaggaaacttgtcact
ctggttaactgtcagctggtggaggaggagggccgcggcagggccatgagagcggcacgg
tcactaggcgagcgaacagtgacagagctcatcttacagcaccaaaatccacagcagctt
tcctccaacctatgggcagctgtaagggcacgcggatgtcaatttctgggaccagctatg
caggaggaggtattgaagctaatactacttgctctagaggatggctcagccttgtcacgt
aaagtgttggtcatgtttgtggttcagcgacttgagacccactatccacaggcatcaaaa
acagccataggtcatgtggtgcagcttctgtacagagcctcctgctttgtggtaacaaag
cgagaggaagaatcatcactgatgcagctgaaggaagagtgcaggacctacgatgccctg
agacgcgaccatgactcccagattgtgcagattgccatggaagcaggtctgaggattgcc
ccggaccaatggtcatctctgttgtatggtgatactacccacaaatcacacatgcagtca
atcatagacaagctgcagacaccgcagtccttctcccagagtgtgaatgagcttgtgatt
gccctacagaggacaggtgatccatgtaatctacagcgactgcgaacacacctcgagttt
ttggctaacatagacccctccccagaggcaccacctccctcctgggagaacttggaggca
gtaatgaaagctgtgcgcagtgtggtccagggactagtagactttgtaaagaacaatgga
cacaaaaagttggaaaacaccactgttcataattcccgatacaaaaccagcatgtgtcga
gatttcttgcagaaaaacagctgtcccagagcttctaactgcacatttgctcattctcaa
gaggaacttgacaagtaccgatcacggaccaagaaagctggcaaggcttgtaacacacca
cctgaatatgaagattgtgacagagatgaccttcagcatatgctaacagaagttcatcaa
gataacaacagatccaatgtggagtcgtttaattcagctgcacaatatgataaccgaagg
aacatgtctctgcccaatgtcgtaacggccaaagtattaacatctgtggcaaagtctttg
tcgtcattgacctttgctcaggctaaggtgttgacatcggacaaaatgactgaatcctct
gaaacaggaccgcggatgagctctgttgtaattcccggtatggcgccaatccttcctcca
ccaaacaccatgcagcccccacctacacaggtgccacgtagtcctttccctccggacatg
taccagggacagagaactcctgctcaactgccccatggtcctggagtaccagctccatca
agacctgtatttggaggtggtgggaatgtgctgactggtagtcccagtgctggcaggcca
gtattccagtctgtgccgaggtttgtgacaggtccctacagaccacaatacaaccaggcc
ctgccacaggcccagtatccagctggtgtaccctttagacagcctgtagacccaggcatg
ccaagaatgcccttccctccacagcagcagcaacctccaatgggttttatgaactataac
taccagcacaattccagtgtccttaacccatatgctgagcccttccaaggcacaggttcc
aggcccctaacaccagaggaccaaatgtaccctgtagtagggaactacccggagggattc
aattaccaaccaggaacagtgttgcatggccaagggcaggctaaaattctaaatgatcta
cgtcatcgccgagcagaaattttaaatcgtctgttcaacccacttgatgattttcaaaca
aatccggagatccctacatattccaataatgcatcatcccagcctgatgcaggtgacatg
tatggaggtggtatccatccaaataaaaccatgttgcaaggaaaccggggtgtcattcag
gccaattctcaaacttctcatggtgcgagacaggatgtcgtccagatgatggcagaacaa
agaggcatgactggcaacatttcagaaccaggacgagaggggacggaatcttccgcagcc
agacataatgcagtacaggtgaacaggaaacaggtttcatgttggcagaaagacttcaac
agcagtcagtcggttacatcctcatatcagtcagccagtcagactcctggctgcgatgaa
tacaaattggtaagccatgagaacaatattactagttctgaaatctcatcaacaaggtat
ctctagttccgcaggagggatatgggtcaaacaagcaattttggagctcaattttaccca
gaagaaactaacgtgtccagttcagctctgcattcaatgcctggatccactgtgtctgtc
aaaaaaaatatcagctcacaggcttataataaccatgaacaagctcaaaacatgacaaat
cttacaagtaaggggaagcttcacagcaagtctgatccttctcgatggagagcaagtcat
tacagtttaatgaacagaaacaggacattcctcaccaagaacggccatgacagggagatg
gattcacccaagcttcatccagatagcttctacgcaagtcgacagaacttgatcggacat
gcctctaggaacacctcgactatatccaaccccagtgacactcaagcagcgttagacaca
ggatgtgctgtgtggtcaatcgacggcatagatgatgtggtgtggaatttcacagacacc
caggcaacgtccaaccagtccaacgagaaggaagatcttctcaaggaggaacagataaac
agtaccgagttcatgttgaactggctgcatgatatcccagatgagccaaccccaatagaa
cctatggaccagtttattctgccactaagccgtgccttggaacgtagtgaagaggatgcc
attataccgtttgattccactccgatggtgtctcggtttggacctatttcaagatcagca
aggaccaagtataaaaacactgagcctgtacaagtcacagccgatgatataatgaaaaag
gtgacacctgtgacagctgtgactccgttagaccacccaaagccgacagccaaggcccag
cctagctatgtagcacctgtggtggagactaccaattcatctggctctgtcagatggcgc
aggcctagtgagttggagaactgtgtacagagagagctgaatcgactggaacaacaagct
ctgaaagctgacacagagaacgaattcttggcatgtgaactgaaagctgtagagttacag
atatcactgcaaactgagaaaactgcatcacagcctgtcccggagactccaatcctaaaa
cctgagatacatcctgctgtagagatggttgcgccagtacccattgctgtccctgtcaag
acagacactcctcataaccctccgggtatctggagcagctttgaactactcaaggcagcg
tacacacgtggacagaaggtggacgaactacgagaactgctaaaacaagtacctatggga
gtggaccaacacattggaacactcactccacaggaggaacagtttctcaaggacgttctt
ggtgaaagtccaggtagtgccaacctgcagacctga

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