Pecten maximus (king scallop): 117322095
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Entry
117322095 CDS
T07399
Name
(RefSeq) spliceosome RNA helicase DDX39B-like
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmax03041
]
117322095
Enzymes [BR:
pmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117322095
Spliceosome [BR:
pmax03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117322095
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_19
ZNHIT3_C
Motif
Other DBs
NCBI-GeneID:
117322095
NCBI-ProteinID:
XP_033732733
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All DBs
Position
2:40934686..40943234
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AA seq
427 aa
AA seq
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MDPMDDIDTELNYIEEPEDETTPPKKAGHVSGGNMKGEYVSIHSSGFRDFLLKPELLRSI
ADCGFEHPSQVQHECIPQAVLSMDVLCQAKSGMGKTAVFVLATLQQLDPVDGQVSVIVLT
HTRELAFQIADDYRKLSRHMNSVKVAVFFGGITIKQDEETMSKNCPHIVIGTPGRILALA
RKGTLKLGNIRHFILDECDKMLEILDMRKDVQDIFRMTPHEKQVMMFSATLGKESRLVCR
RFMQDPLEVFVDNCSKLTLHGLRQFYVQVTEKEKNRKLVTLLDALEFNQVIIFVKSVQRC
VALAKLLLDQNFPAITIHSAMKQEERLSRYKQFKEFEKRLLVSTNLFGRGMDVVGVNIVF
NYDMAEDSDTFLHRVARAGRFGTKGMAITFIANEMEATIMNKVQERFQVNVPVLPDEIDT
SSYLPGK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggatcccatggatgatatcgacacagaacttaattatattgaagagcctgaagatgaa
accacgccccctaagaaagctggccatgtctccgggggcaacatgaaaggggaatatgtt
tctatacatagctcgggattcagggacttccttctcaagccggaacttctgcggtccatc
gccgactgtggatttgaacatccatcacaagttcaacacgagtgcatcccgcaagcagtg
ttgtcgatggacgtgttgtgtcaagccaagtctggtatggggaagactgctgtgtttgtt
ctggccacacttcaacagttggaccctgtggacggacaggtttctgtcatagtgttgaca
cacacccgggaacttgccttccaaattgcagacgactaccggaagctatctcgtcatatg
aacagtgtcaaggtcgctgtgtttttcggaggaatcactatcaaacaagacgaagagacg
atgtcaaagaactgtccccacattgtcataggaactcccggccgcatcttagcactggct
cggaaagggacactcaaactgggaaacatccgccattttatcctggacgagtgtgacaag
atgcttgaaatactagacatgaggaaagatgttcaagatatattcagaatgacgccacac
gagaaacaagtcatgatgttcagcgccacccttgggaaggaatctcgtcttgtctgcagg
aggtttatgcaggatccattggaggtctttgtagacaactgctccaagttgaccctgcac
ggccttcgacagttttatgtccaggtcacagagaaggagaagaacagaaaactcgtgaca
cttctcgatgccctggaattcaaccaggtgatcatatttgtgaagtccgtccagaggtgt
gtggctctagccaagttgctgttggaccagaacttcccagccattaccatccacagtgcc
atgaagcaagaggaaaggctatctcgatacaaacaatttaaggaattcgagaagcgactc
ttggtgtccacgaatctttttggccgagggatggacgttgtcggagtcaacattgtcttc
aattacgacatggcagaggactcggacacctttctccatagggttgctagagctgggaga
ttcggcacgaagggcatggccatcaccttcatcgccaacgagatggaggccacaataatg
aataaggtacaggaacgattccaggtcaatgttcctgttttacctgatgaaatcgacaca
tcctcttaccttccagggaaatga
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