Pecten maximus (king scallop): 117322244
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Entry
117322244 CDS
T07399
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax04140
Autophagy - animal
pmax04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117322244
04148 Efferocytosis
117322244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmax04131
]
117322244
Membrane trafficking [BR:
pmax04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117322244
Hops complex
117322244
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_WDR19_1st
DUF2839
Motif
Other DBs
NCBI-GeneID:
117322244
NCBI-ProteinID:
XP_033732936
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Position
2:complement(45618735..45643713)
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AA seq
829 aa
AA seq
DB search
MATADWNPLGDVYFKKNELYAMGWSDVIDLDKFTVASAPYGGPIALYRDDSKTARVQVST
KPIITVFTAAGNQISQMRWSSGQVVKMGWSNTEDLLCVQDDGMVLSYDMFLNFKRMFGMG
QEAKDVKVLDCEIFNSFQGTGIAVLTSTFRIFIINSVDDPRIRRLAEVPGLQTAPSSWAV
LNLDRQSRALVAKGHELFLIDHGGQYQNQTPQTSTEVKEYIQMALSFNNKFLALYTDTGV
ILICSSDLQKVYCEFNTKTETCPRQLMWCGIGAVVALWGTLMVVVGPQKDWIRYNFESPV
HLVQEMDGTRIIGNYQHEFLHKVPEVTEHIFKIGSMEPGAMLYEASREFHKGSQKADEYI
RMIKDKLEVAVNQCIEAAGFEIETDKQKALLRAATFGKCFLTDYSPETFVNMCQMLRVIN
QVRHHKIGIPITYTQLEHLSMAVMIDRLVLRKMFHLAIKICQYLKIPDQEGASRILAHWA
CYKVKQKNEDDETIARAIAQKLGDTPGVSYCDIASQALECGRTDLAIRLLDFEPRAAQQV
PLLMKMSKDQLALSKAIESGDTDLVYTVLLKLKNDMKDGDFFMAIRNMPIAYSLFIQYCR
HQNPQMMEDLYYQEDNFLEEANCKVVKSFDDERLDDRCETLKQAMNCYARAKNEFAVKQT
DEQMKLLRYQRRMEEEFNRPYMDLSLHQTIYRLIVENSHKPAEQLRKEFKVPERRYWWLR
MHALGQAGEWAELERFSKSKKPPVGLEAFVEVCSKHKNVAEAMKYIARVQPDQKVKCLLK
IGQKKSAAEAAFENHSEDDLNLVLQKCGAADKQLVENIRSMKQQLGGRR
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcggactggaatccgcttggcgatgtttatttcaaaaaaaatgagctctat
gccatgggatggagtgatgttattgaccttgataagtttactgttgcttcagccccctac
ggaggaccaatcgctctgtaccgagatgactcgaagacggcacgcgtccaagtgtccacc
aaacctatcataacggtcttcacagctgctggtaaccaaatcagtcagatgaggtggagc
agtggtcaagtggtcaagatggggtggtcaaacacggaggatctgctttgtgttcaggat
gatggcatggttctgtcctacgacatgttcctcaatttcaaacgcatgtttggcatggga
caggaagccaaggacgtgaaggtgttagattgtgagatatttaacagtttccaggggaca
gggatcgccgtgctgaccagcaccttccgtatcttcatcattaacagtgtggatgacccc
aggatacggagactggctgaggtcccaggtttacaaacagctcctagtagctgggctgtt
ctaaatcttgatcgacagtcccgagcgttggtcgcgaagggtcacgagctgttcctgatt
gaccacgggggtcaatatcaaaatcagacaccacaaacaagcacagaggtcaaagagtac
atacaaatggcactgtccttcaacaacaagttcctagctctgtataccgacactggtgtt
atcctcatctgttcctcagatttacagaaagtttactgtgaatttaacaccaagacagaa
acttgccctcgccagttgatgtggtgtgggatcggagcagtggtggctctgtggggtacc
ctgatggtggttgtggggcctcagaaagactggatacgatataactttgagtcaccagtc
cacttagtacaagagatggacggcaccagaatcatcggcaattaccagcatgagttcctc
cacaaagtaccggaggtgacagagcacatatttaagataggatctatggagccgggggca
atgttgtatgaagcatctcgagaatttcataaaggatcccagaaagctgatgagtacatc
cgtatgatcaaagacaagctcgaagtcgctgtaaaccagtgtatagaagccgcagggttt
gagatagaaactgacaaacagaaagctttactacgggcggcgacgtttgggaagtgtttt
ctcacggactacagccccgagacgtttgtcaatatgtgtcagatgttacgtgtcattaac
caagtccgccatcacaagatcggaatccccatcacttacacacaattggagcatctctct
atggctgtaatgattgataggttagttctcaggaagatgtttcacctcgccatcaaaata
tgtcagtatctcaagatcccggaccaggagggagctagtcgaattctggctcattgggcc
tgttacaaggtaaaacagaagaatgaagatgatgagacaatagctcgagccatcgctcag
aaacttggtgatacccctggtgtgtcgtactgtgatatcgctagtcaagctctggaatgc
ggccgaacagacttggccattaggttgttggactttgagccccgagcagcccaacaggtt
cccctccttatgaagatgagcaaagaccagctggctttatctaaggccatagagagtggg
gacactgaccttgtttacacagtgcttctgaagctcaagaatgatatgaaagatggagat
ttcttcatggccatcagaaacatgcccatagcctattctctctttatacagtattgtcgc
caccaaaatccacagatgatggaggatctatattatcaggaggacaacttcctggaggag
gccaactgtaaggtggtcaagagttttgatgatgaaagactggatgacagatgtgaaaca
ttaaaacaagctatgaactgctacgctagagctaagaacgaatttgctgtcaagcaaaca
gatgagcagatgaagttactgaggtaccagcgacggatggaggaggagtttaaccgtcct
tatatggacctgtctctacaccagaccatatatagacttattgtggagaacagtcacaaa
cctgctgaacagctacgcaaggaattcaaggtcccagagaggaggtactggtggttacgg
atgcatgcccttggacaagcaggtgaatgggccgagttagaaagattctccaagtcgaag
aaaccccctgtaggactagaggcatttgtagaagtgtgttccaaacacaaaaatgtagca
gaagccatgaagtatatagccagagttcaaccagatcagaaggtcaaatgcctgctgaag
attggtcagaagaaatctgctgcggaggctgcgtttgagaaccacagtgaggacgacctg
aacttagtgttacagaaatgtggagctgctgacaaacaattggtagaaaatatacgctca
atgaaacaacagcttggtggccgcagatag
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