Pecten maximus (king scallop): 117322301
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Entry
117322301 CDS
T07399
Name
(RefSeq) coatomer subunit alpha-like isoform X1
KO
K05236
coatomer subunit alpha
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmax04131
]
117322301
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmax04147
]
117322301
Membrane trafficking [BR:
pmax04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
117322301
Exosome [BR:
pmax04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117322301
Exosomal proteins of bladder cancer cells
117322301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
117322301
NCBI-ProteinID:
XP_033733023
LinkDB
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Position
2:complement(47040176..47063371)
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AA seq
1229 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLASLFNGVIQLWDYRMCTLIDKFDEHDGPVRGICFH
QQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHQDYIRTTYFHHEYPWILSASDDQTIRIW
NWQSRSCVCILAGHSHFVMCAMFHTSEDLIVSASLDQTVRVWDISGLRKKNVAPGPGGMN
ERSRSPGQTDLFGMSDAVVKHVLEGHDRGVNWAAFHSTLPLIVSAADDRQVKLWRMNESK
AWEVDTCRGHYNNVSSCLFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRREHDRFWIMA
AHPNLNIFAAGHDSGMLIFKLERERPAYAVHNNILYYVKERYLRRLDFTTNKDNPVMQLR
GAGRGNNGTRCPVYSMSYNPAENNVLLCTRTSNLDNSTYDLYGIPKDTDSSSPDAPEGKR
SSGLTAVWVARNRFAVLDRTHNIVIKNLKNEITKKLQAPNCDDIFYAGTGCLLLKDADGV
TLFDVQQKRALASVKISKVKYVIWSSDMSHVALLSKHIISICNRKLENLCTIHENIRVKS
GAWDESGVFVYTTSNHIKYALTNGDHGIIRTLDLPIYITRVKGNSVYCLNRECVPGRLVI
DPTEFKFKLALINRKYEEVLHMVRNAKLVGQSIISYLQKKGYPEVALHFVKDEKTRFGLA
LECGNIEIALEAARSLDDQACWERLGESALLQGNHQVVEMAYQRTKNFDKLSFLYLITGN
LEKLKKMMKIAEIRKDTSGHFQNALFLGDVSERVRILKNCGQKSLAYLTAATHGIEDEAE
QLKAGFGEKDRTPDLYPAAKLLHPPVPIMQQESNWPLLTVSKGFFEGAMAAGGGKAKGLA
KAAVDIEDGVEDGWGADVDNIDLGDDGFGGDGMDEDEIGAGEEGGGWDVDDVELPTDLDI
GPTPSAGEEGFFVPPTKGQSQSQVWCNNSQLPVDHVLAGSFETAMRLLHDQIGVVSFEAY
KQLFLQTYSRARTCFQGVPTLAPMFGFPHRNWKEAGARNGMAAVGLKLNTLVQQLQVAYQ
LTTSGKFPEAIIKFRNILLSVPLLVVDNKQEIAEAQQLIEICREYIVGLSMEQKRKELPK
ATLEDQKRLCEMAAYFTHCSLQPVHMILTLRTAQNLFFKLKNFKTAATFARRLLECGPKP
EIATQTRKMLAACEKTPTDAHELKYDQHNPFDICSASFTPIYRGKPVVKCPFSGACYHPD
YKGQVCRVTQVTEIGKDCIGLRISPIQFR
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagtttgaaacgaagtctgcaagggtgaaaggtttgtcctttcatcctaaa
aggccttgggtcctggctagcttgttcaatggagtcattcagttgtgggactatcgaatg
tgtacactcattgacaaatttgatgaacatgatggacctgtgagagggatttgtttccac
caacaacagcccctgtttgtgtctggtggtgatgattataaaattaaggtgtggaattac
aaacaacggcgatgtctatttacacttctgggccaccaggactacatcagaactacatac
ttccaccatgaatacccttggattctgagtgcctccgacgaccagacaatccggatatgg
aactggcagtctcgcagttgtgtctgcatcttggctggccacagtcacttcgtgatgtgt
gcgatgtttcatacgtcggaggatttgattgtgtcagcatcccttgaccaaaccgtccgt
gtgtgggacatttcaggactgaggaaaaaaaatgtggcccctggtccaggtggtatgaat
gagcgctccagaagtccaggacagacagacctgtttggtatgtctgatgctgtggtgaaa
catgtgttggaaggacacgaccgtggggtcaactgggctgccttccactcaacactgcct
ctcattgtctcggccgctgatgaccggcaagtcaagctctggaggatgaatgagtcgaaa
gcttgggaagtagacacatgccgtggccattacaacaatgtgtcaagctgtctgttccat
cctcgccaggaacttatcctgagtaactccgaggataaaagcatccgtgtatgggacatg
agcaaaaggactggtgtgcagaccttccgacgtgaacacgatcgcttctggataatggct
gcccatccaaatctcaacatctttgctgcaggccatgacagtggcatgcttatattcaaa
ctagagcgtgaacgaccagcatacgccgtccacaataacattctctactacgtgaaggag
cggtatctccggcgtttggatttcaccaccaataaggacaaccctgtgatgcagctccga
ggtgctggcaggggtaacaatggtaccaggtgtcctgtgtacagtatgtcatacaaccca
gctgagaacaacgtccttctctgtacgaggactagtaaccttgacaactcgacttacgac
ctctacggtatccccaaggacactgactcatccagccccgatgctccagaaggaaaacgt
tcctcaggtttgactgccgtgtgggtggcacggaacaggtttgctgtcttggacagaact
cacaatattgtaattaaaaatctgaagaatgaaatcaccaaaaagctgcaggctcccaac
tgtgatgatatcttctatgctgggacgggttgtcttcttctgaaggatgctgatggtgtc
acactttttgatgtacaacaaaagagagcccttgcctccgtgaagatttccaaggtgaag
tatgtaatctggtcctccgacatgtcacatgttgccctcctcagcaaacacatcatatcc
atctgtaacagaaagttggagaatttgtgtaccatccacgagaacattcgtgttaagagt
ggagcgtgggacgagagcggcgtgtttgtgtacaccacaagcaaccacatcaaatacgcc
ctcaccaatggcgaccatggtatcatccgaaccctggacttaccgatctacattacgcgc
gtcaagggcaacagtgtgtactgtctgaatcgagagtgtgttccaggacgtcttgtcatt
gacccgacagagttcaagttcaaacttgccctcatcaaccgaaaatatgaagaggtactc
catatggtgagaaatgccaaactcgtcggccagtcgatcatctcctacctacagaaaaaa
ggctacccagaggttgccctccattttgtcaaggatgagaagacacgctttggtcttgca
ttagagtgtggaaatattgagattgcgttggaggcggcacggtccctggatgaccaggca
tgctgggagagacttggcgagtcggccctgctccagggtaaccaccaggtggtagagatg
gcttatcagagaacaaagaacttcgacaagctctccttcctttaccttatcacaggaaac
ctggagaaactgaaaaagatgatgaaaattgctgagatcaggaaggatacgagtggacat
ttccagaatgcactgtttcttggtgatgtatcagaacgtgtcaggatcctgaagaactgt
ggacagaaatcattggcctacctaactgcggcgactcatggtatagaggatgaggcagaa
cagttgaaggcaggctttggtgagaaggatcgcactccagacttgtacccagctgccaag
cttcttcatccaccagttcccatcatgcaacaggagagcaactggcctcttctcacagta
tccaagggcttcttcgaaggggccatggctgctggaggtggtaaagccaagggcctagcc
aaggcagccgtagacatagaggatggtgttgaagatggctggggagcagatgtggataac
attgatcttggtgatgatggctttggaggtgatggtatggatgaggacgagattggagcc
ggagaggaagggggaggctgggacgtggacgatgttgaacttcccactgaccttgacatt
ggtcccaccccatcagctggggaggagggcttctttgtaccacctaccaaaggacagagt
cagtctcaggtgtggtgtaacaactctcagcttcctgtggaccatgttttggccggatcc
ttcgagaccgcaatgcggctgctccacgaccagataggggtggtgagtttcgaagcatat
aaacagctgttcctgcagacctacagcagggcgaggacgtgtttccagggtgtacctacg
ctggctccaatgtttggcttcccacatcgcaactggaaggaagccggggccaggaacggt
atggctgccgttggtctgaagttaaacacacttgttcagcagctacaggtagcctaccag
cttacgacatcaggaaagttcccagaggccatcatcaagttcagaaacattctacttagc
gttccactccttgtggtcgataacaaacaggagatagcagaggctcagcagctgatcgag
atatgtcgggagtatatagtggggctgtctatggaacagaagaggaaggagctccctaag
gctacactggaggaccagaaacgactgtgtgagatggccgcctacttcactcactgcagc
ctacaaccagtacacatgatcctcactcttcgtacggcacagaatctcttcttcaagcta
aagaatttcaaaactgctgcaacgttcgcaagacgactgctggaatgtggtcctaaaccg
gaaatagctactcagacaaggaagatgttggctgcctgcgagaagaccccgacagatgca
catgagctgaaatatgatcaacacaatccgtttgacatctgttccgcttcgttcacacct
atatacagaggaaaaccagtggtgaagtgtccgttcagtggagcttgttatcatcccgac
tataagggacaggtgtgtcgggtaactcaggtgacagagattggaaaggactgtataggt
ttaagaataagtccaatacagttccggtaa
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integrated database retrieval system
