Pecten maximus (king scallop): 117322912
Help
Entry
117322912 CDS
T07399
Name
(RefSeq) LOW QUALITY PROTEIN: vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax04140
Autophagy - animal
pmax04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117322912
04148 Efferocytosis
117322912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmax04131
]
117322912
Membrane trafficking [BR:
pmax04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
117322912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
117322912
NCBI-ProteinID:
XP_033733768
LinkDB
All DBs
Position
3:complement(1598734..1629676)
Genome browser
AA seq
878 aa
AA seq
DB search
MHDAYEAIPILEKLPLKIESIECYDDTLLVGTKECHLLQYKVKTHSRYQKAEVKLERSYK
NFARKPILQLAVVPELFLLISLSDNIISVHELSTFGLITCMSKTKGATLFAIGVQRTKSL
SGEVACTLRLSVAIKRKIQTYYWKNRDFMDLQPEFNMYDVPRDMVWCKDTICVGFKRDYF
IVKINTGNTKELFPVGTKQQEPIVTRLENDTLLLGRDEMSILIDDEGSPTQKYPINWTDI
PIQIENHPPYLIALLPKHVEVRTISPRLLIQNIDLQKARYICQGSGCIYVASSNYVWKLN
AMPIAYQIRQLLEANQFELALHLADMTEEPEDEKQNRINRIKTLHAFNLFCECKFEESMN
IFVKLGTDPSHVIGLYPNLLPNEYRSQLEYPNRPPELEGGDLEKGLLALQDYLTQKRVDV
CKDINKEVQTTAIKEGNKTIKSKRQLSQIIDTTLLKCYLQTNDALVAPLLRIKDNNCHVE
ESEKILKRKEKFSELIILYEKKGLHQKALNLLMNQAARPSSPLKGHDRTVQYLQHLGREH
LDLIFEYAEWVLKQHPEDGLKIFTEDLTEVDSLPRDKVFKYLEKAAKDLAIPYLEHVILE
CEDHNSDFHNSLAQLLRDKVQTLMADYIQSLPEGHLPSKAGQEQGELGEYRRKLINFLQM
SHDYIPERLLTRFPLDSFYEERAILLGRLGRHELALGIYVHILHDTPAAERYCQEYFERN
REENRDVYLDLLKMYLQPPSSSALGISAGQGFTPKPSMEAALRLMKEHASKIDSTKALEL
LPAATRIEEILNYLESVMEHQATVRRKNQVLKSMFYAENLQVHEQTMFYHKHKVVINDEK
MCKVCKKRIGNSAFARYPSGMVVHYFCCKDPKVNPLEK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgcgtacgaggccattcccatcctggagaagcttccattgaaaatcgaatct
atagaatgttacgatgacacattgcttgttggaacaaaagaatgccatcttttacaatac
aaagtgaaaacgcacagcaggtatcaaaaagcagaggtgaaattagagagatcatacaag
aattttgccaggaaacccattttacagttggcagttgtgccagaattgttcctgctcatc
agtctttcagataacatcatcagtgtacatgaactgtcgacatttggtctaataacatgt
atgtccaaaacaaaaggagccacactttttgccataggtgttcagaggacgaagtcctta
agtggagaggtcgcttgtacactccgcctgtctgttgccataaaacgcaagatacagact
tactactggaagaaccgagatttcatggacctccagcctgaattcaacatgtacgacgtt
cccagagatatggtgtggtgtaaggatacaatatgtgttggcttcaagcgggactatttc
atcgttaagattaatacagggaacactaaagagctgtttcctgtaggaaccaaacaacag
gaaccgatcgtaacacgactggagaatgatactcttcttcttgggagggacgaaatgtcc
attctcattgacgatgagggtagtcctacgcagaaatacccaataaactggactgatatc
ccaatacagatagaaaatcaccctccatatctcatagccttattacctaaacatgtggaa
gtccgaacgatatccccacgtcttctcatacagaacattgacctacagaaagctcgctac
atctgccagggaagcggttgtatatatgtggcctcctctaactatgtgtggaaactgaac
gccatgcctatagcttaccaaatacgacagctgctggaagcaaaccagtttgaactagct
ctacatctcgctgatatgacagaggagccagaggatgaaaaacagaaccgaattaacaga
ataaaaactcttcatgcatttaatttattttgtgaatgcaagtttgaagaatccatgaat
atatttgttaaattaggaacagatccatctcatgtgatagggctctaccctaatctccta
cccaacgagtaccgaagtcaactggagtaccctaatcggcctccggagctggagggggga
gatctggagaaaggtctcctggccttacaggactatcttactcagaaaagggtggatgtt
tgtaaggatatcaataaagaagttcagacgacggccatcaaggaaggaaacaagaccatc
aagtctaaacgtcaactcagtcagattatagacaccaccctgcttaaatgttatctacag
acaaacgacgccttggtggcgccactgttgagaatcaaagacaataactgtcacgtagag
gaaagtgaaaaaatcctaaaacgtaaagagaagttcagtgaactcatcatcctgtatgaa
aagaaaggacttcaccagaaagccctaaatctgttgatgaaccaggctgcccgtcccagc
tccccactcaaaggccatgaccgcacagtgcaatatctacaacatctgggaagggaacac
ctagacttgatatttgagtatgctgagtgggtgttaaaacagcatcctgaggatggactc
aaaatatttactgaagatttaactgaagtagacagccttcctcgggataaagttttcaaa
taccttgaaaaagcagcaaaagatctcgccattccttatttggaacacgtaattttggaa
tgtgaagaccataattctgacttccacaattccctggctcagttacttcgtgataaagtc
cagactctaatggcggactatatccagtcactacctgaagggcacctgcctagtaaggct
ggacaagaacaaggtgaactcggagagtaccgtaggaagctgatcaacttcctacaaatg
tcacatgactacatcccagagagattgctgacacggttcccattggacagtttctatgag
gagcgagccattctgttggggaggctagggagacatgagttggctctcggtatctacgtc
catatcctccacgatacaccagccgctgaaaggtattgccaggaatactttgaacgaaac
agagaagagaatagagatgtgtacctcgacttgctgaagatgtacttacagcccccatct
tcctcagccctggggatctccgctggtcaagggtttactcctaaaccgagtatggaggct
gccctacggcttatgaaggagcatgcctctaaaattgactctacgaaggcgctagagttg
ttgccagcagcgactagaattgaagaaatattaaattatttggaaagtgtgatggaacac
caggcaactgtaaggcggaagaatcaggtcctgaaaagcatgttttatgctgaaaattta
caggttcatgaacagacgatgttttatcacaaacacaaagtggttatcaatgatgagaag
atgtgtaaagtctgcaagaaaagaattggaaacagtgcgtttgcccgctaccccagtgga
atggtcgtccattacttctgctgtaaagaccctaaagtcaacccgctggagaaatga
DBGET
integrated database retrieval system
