Pecten maximus (king scallop): 117323060
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Entry
117323060 CDS
T07399
Name
(RefSeq) DNA polymerase beta-like isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117323060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmax03400
]
117323060
Enzymes [BR:
pmax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117323060
DNA repair and recombination proteins [BR:
pmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
117323060
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
117323060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
DNA_pol_lambd_f
HHH_5
NTP_transf_2
Cdd1
5_3_exonuc
B-block_TFIIIC
Motif
Other DBs
NCBI-GeneID:
117323060
NCBI-ProteinID:
XP_033733954
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All DBs
Position
1:complement(5447590..5469814)
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AA seq
336 aa
AA seq
DB search
MSKRKAPTSDNVNSEFCDFLMELANYEKNVNRAMHKYNAYRKAAGVLAKHPTRISTGEEA
KKLDGIGDKIGKKIDEFVKTGKLVKLEKIRADDTSVAINALTKVTGIGPAAAQKLVQEGI
MSVEDLRKHTDKLNHHQQIGLKYYEDFEKRIPRHEVIQLRDVAVKEVKQLDSEYTCEVCG
SFRRGAASSGDIDILMTHPSFTSESGKKPKLLTRVVEKLEACGLVTDRLSLGDVKFMGVC
QLGDTDSQKDRAYQRIDIRLIPNDQYYCALLYFTGSDQFNKGMRAHALEQGFTLNEYCLR
PVGSTGTPGEPLPVSSEEDIFDYLGMEFKKPEERNL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggaaagctcccacttctgacaatgtcaattcggaattctgcgacttcttg
atggagttggcaaactatgaaaaaaatgtaaatcgtgcaatgcacaaatacaatgcctac
agaaaagcagcaggagttcttgccaagcatccaactcgtatcagcactggggaagaggca
aaaaagcttgatggaattggggacaaaattggaaaaaagattgatgaatttgtcaaaaca
ggaaagctagtcaaattagaaaagatccgggcagatgacaccagtgtggccattaatgca
ttgactaaagtgactggtattgggcctgctgcagcccagaaacttgtacaggagggtatt
atgtctgtagaagatttacggaagcatacagacaaactcaatcaccaccaacagattggt
ctcaaatattatgaagactttgaaaaaagaattccaagacacgaagtcattcaattaagg
gatgttgctgtgaaggaagtaaaacaactggacagtgaatatacctgtgaagtgtgtgga
agttttcgtcgaggtgccgcttccagtggtgatatagatattctaatgactcatccttct
tttacctcggagtcagggaaaaagcctaagttgcttactcgagtggtggagaagctggaa
gcctgtggactagtaacagacaggctgtcactgggagacgtcaagttcatgggtgtgtgt
caactaggggacactgacagccagaaagatcgagcttaccagcgcattgatatcaggttg
ataccaaatgatcagtattactgtgccttactttacttcactggcagtgaccagtttaac
aagggcatgagagcacatgcattggaacagggtttcactctcaatgaatactgtctgagg
cctgttggcagtacaggtacacctggagaacccctccctgtatcatctgaagaggacatc
tttgattaccttggaatggagtttaaaaaaccagaagaaagaaatctgtag
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