Pecten maximus (king scallop): 117323062
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Entry
117323062 CDS
T07399
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax04137
Mitophagy - animal
pmax04140
Autophagy - animal
pmax04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117323062
04137 Mitophagy - animal
117323062
04148 Efferocytosis
117323062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmax03000
]
117323062
Transcription factors [BR:
pmax03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117323062
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
PAS_9
HIF-1a_CTAD
HIF-1
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
117323062
NCBI-ProteinID:
XP_033733953
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Position
3:7658373..7702262
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AA seq
758 aa
AA seq
DB search
MTATGKRRNSEKRKEKSRDAARCRRGKETEVFSELAKELPLPPCLNQLDKASVMRVAISH
LKIRQIMDKMDIQDLDSNEMLEDVDNLYGKALDGFVAIISDNCDMAYVSESVAKYLGIPQ
IDMIGQSLYDFTHPCDHDELTDMMSTKSHKGMEQAAEEHSIFVRMKCTLTSKGRSVNLKS
ASYKVIKFTGKLIEIKEERVVQQEEEDDDDDERDDDIEQEMKVEKEARRTGYFLGVGEPI
PHPSNIEVPLDCKTVLSRHNMDSKFTYCDSRMKELVGYSSEELIGKSIFSYHHAQDSNII
DKAYRDLFAKGQMMTGQYRFLVKQGGFVWVITQATVIYNSRTQKPQCIVCVHYVTSGVEQ
DNMILSDVQDAEVKTEVKKDVKEVIQWSFGPSTKDVFVTKTEDDKEDFYFSEVPKTRCKQ
MDLQHLAPIAGDACVPLDTTFFKGQPKQDQGNDLPVIILKEEPRMTLCSGNDPKMISPAS
TACSTPLTASPMHSPTPPVSEDFLITINPADIVAMDQFFTTMDMTQMQMSDGCLSGEEID
MDTRAPYIPMDSSDDFSLLPPAPDELFNLNADFNPGLFGRTESVFTSKDKLFPEEPPQKR
QSLWDMLEGSTTVATIKRPVDMGIMQMKRPLDQTNQEKGPPIAKRSCPDVGNKSLSRGQL
GSDSVLMNLLLTGEDRSYGYSVFTAQNEKTAKSTKIEQVHKQIPSRASNWNPTKCAFLPK
ITQHDCEVNAPSQPNDGLLQGEAIMQALDIDAFPPQII
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgactgctacaggaaaacggaggaattcggagaaaagaaaggagaagtcccgcgatgct
gctcgatgtcgtcgtgggaaggagactgaggtgttttcagagctggctaaagaactgcct
ctgccaccctgtctcaatcagctggacaaagcttcagtgatgagagtggccattagtcac
ctcaaaatacgccagattatggacaaaatggacattcaagatttggattccaatgaaatg
ttggaggatgttgacaacctctatggaaaggctttggatggctttgtggccatcatttcg
gataactgtgacatggcctatgtctctgagagtgtggctaaatatcttggcatacctcag
atcgatatgattggtcagagtctgtatgacttcactcacccttgtgaccacgatgagctc
acggacatgatgtccaccaagtctcacaaaggcatggagcaggccgccgaggaacacagt
atttttgtgaggatgaaatgtacgctcaccagcaaggggagaagtgtgaatctcaagtca
gcttcatacaaggtgattaagtttactggaaagctgattgagatcaaggaggagagagtg
gtgcagcaggaagaggaagatgatgatgacgacgaaagggacgatgacatagagcaggag
atgaaggtggagaaggaggctcgacgtactggatatttcctcggtgtcggcgagccgata
ccacacccctctaacatagaggtgccactcgactgtaaaacagtcctcagcaggcacaac
atggactccaaattcacttattgtgacagcaggatgaaggaattggttggatacagtagt
gaagagcttattggtaaatccatcttctcctatcaccacgcccaggacagtaacatcatc
gacaaagcatatagggacttgtttgctaaaggccaaatgatgactggtcagtacaggttc
ctggtcaagcagggtgggtttgtgtgggtcatcactcaggccacagtcatctataacagc
cggacacagaagccccagtgtatagtgtgtgtccattacgtcacaagtggggtagaacag
gacaatatgattctgtcggatgtacaggacgctgaagtcaagacagaggttaagaaggac
gtgaaggaggtgatccagtggagtttcggaccgagcacaaaggacgtttttgttaccaag
accgaggatgataaggaagacttctacttcagtgaagttcctaaaactcgctgtaagcaa
atggatcttcagcatctggcaccaattgctggagatgcctgtgttcctctggacacaact
tttttcaaaggacaacctaagcaggatcaagggaatgacttgccagtaatcattctgaag
gaggagccaagaatgacgctgtgtagcggaaacgatcccaaaatgatcagtccggccagt
acagcttgctcgaccccacttacagcatctcccatgcacagcccaactccgccagtttcg
gaagacttcttgataacgataaacccggcggatattgtcgccatggaccagttcttcacc
actatggatatgacacaaatgcagatgtctgatggctgcctttcaggggaggaaatcgac
atggacaccagagccccctacatcccgatggactctagcgatgacttcagcctgcttcca
ccagcacctgatgagctctttaaccttaacgcagacttcaaccccggtctgttcggccgc
actgaatcggttttcacttcaaaagacaagctgttccctgaggaaccaccacagaagcgc
cagagtctgtgggatatgttggaagggagtaccactgttgccactatcaagcggcctgtt
gacatgggtattatgcaaatgaagcggccactggatcagaccaatcaggaaaaaggacct
cctatcgcaaaacgaagttgtcctgatgtaggaaataagtcactgagtagaggtcaatta
ggcagtgacagtgttctcatgaacttacttttaacgggcgaagatcgctcctacggatat
agtgtatttacagcacagaatgaaaaaacagcaaaatcaacaaaaatagaacaggtacac
aaacagataccctcaagggcttcaaattggaaccctacaaaatgtgcgttcctccctaag
attacacagcatgattgcgaagtcaacgcaccatcccagcctaatgacggtctgcttcaa
ggtgaggctataatgcaagctttggatatagatgcttttcctccgcaaatcatttga
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