Pecten maximus (king scallop): 117323344
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Entry
117323344 CDS
T07399
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117323344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmax03009
]
117323344
Ribosome biogenesis [BR:
pmax03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117323344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
TIP49
AAA_16
AAA_22
AAA_2
AAA_5
AAA_14
AAA_28
RNA_helicase
NPHP3_N
AAA_17
AAA_33
AAA_18
ABC_tran
Mg_chelatase
Rad17
nSTAND3
Vps4_C
ATPase
IstB_IS21
TsaE
AAA_3
Cytidylate_kin2
NACHT
AAA_7
NB-ARC
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
117323344
NCBI-ProteinID:
XP_033734394
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All DBs
Position
3:15790266..15812371
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AA seq
952 aa
AA seq
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MSGQKKQKGHYFSDPRLLSRVRQYVKYANASRKPVVASVMADDLQNQFSEYSRKKKNAFT
KSVEKAYTVVLKETDVDNTNQLEDQHLRKRQKTSTNNQSLPEFDGDGDSSDSDASFSSNP
DNYVSYEDRNGMNSMMTSLYQKSPRSVPSKDNSNSKLSSPWYDSSSQTSKKDSAISFCDQ
IDLTGSPSSFVSKEDEGNTNQSGLPEEMDADGDSPAFFIDRVGSKGSNSTPNDKSQHHNK
PGADAGDLNDQKSKKKRTKEGSARKVIKKRKKKDDDSGDENQGKKSKGPEVQISSATFAD
FGGNEECLMEVCKLLVHMKHPEVYQQLGVTPPRGFLLHGPPGCGKTLLANAIAGELGLPF
IKIAATEVVSGVSGESEEKIRDLFDKAVTSAPCIVFIDEIDAISPKRETASKDMERRIVA
QLLTCMDDLGSKTDSHVLVIGATNRPDSIDPALRRAGRFDREICLGIPDEKARKRILLVL
CRELKLTENFDFDFLAKNSPGYVGADLMSLAREASMTAVNRVFQKLQASDGIPGTSSQNT
VSKVVPSDISKEGQTDISIIGQTDISTTGQTEPSKEGETDISKERQTEISKEEQTDVSME
ICTNESTNDTTAKRDTQKEIHAELETVLSWLKEHPPLSPQQMENLYITMEDFMEALKYVQ
PSAKREGFATIPDVSWDDIGALHTVREDLQLAILAPVKHSEAFSELGLNRAQGILLAGPP
GCGKTLLAKAVANESGINFISVKGPELLNMYVGESERAVRQVFQRARNSSPCVIFFDELD
ALCPRRTDGGEGGSSVRVVNQLLTEMDGLEERKQVFIMGATNRPDIIDPAVLRPGRLDKT
IYVGLPNSSDRLDILMTITKKGTKPKLEEDVNLEDVANDPRCQRYTGADLAALVREASVC
ALKTIINSTADNKPSLIVTKQHFELAFTRVRPSVSTKDQAKYEKLKESLSSE
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccaaaagaagcaaaagggacattatttcagcgatccacggttgttgtcgcgt
gttcgacagtatgtcaaatatgctaatgcctcaaggaaacctgttgttgcaagtgttatg
gcagatgacctacagaatcaattcagcgaatattccaggaagaaaaaaaatgctttcaca
aaatcagttgaaaaagcatacacagttgtcctaaaggaaaccgatgtggacaacaccaac
caactggaagaccaacatctccgaaaaagacaaaaaactagtacaaataatcaaagtttg
ccagaattcgacggtgatggtgattcctcggattcagatgcaagtttctcctccaaccct
gacaattatgtgtcatatgaagatagaaatggaatgaacagcatgatgacaagtctttac
cagaaaagccccaggtctgtgcctagtaaagataacagtaactccaaactttcctcaccc
tggtacgattctagttcacaaacttctaaaaaggattctgcaatttcattttgtgaccaa
attgacttgactggttctcctagctcatttgtatcgaaagaggatgaaggaaatacaaat
caaagtggattacctgaggaaatggatgctgatggcgacagtcctgcattctttattgat
cgtgtagggtcaaagggaagtaactccacacctaatgataagtctcaacatcataataaa
cctggtgctgatgctggtgatctgaatgaccagaagtctaaaaagaaacgtacgaaggaa
ggaagtgctagaaaggttataaagaaaaggaaaaagaaggatgatgatagtggtgatgaa
aatcaaggaaagaaaagcaaagggccagaagtgcagatatcatcagcgacatttgctgat
ttcggcggcaatgaagagtgtttgatggaggtatgtaagctgcttgtccatatgaaacat
ccagaggtataccagcaattaggcgtgactccacctcgaggattcctcctgcacggaccc
ccaggctgtggcaagactctactggcaaatgccattgctggggagttgggtttacctttc
ataaagatagcagccacagaggtggtgtcgggtgtgtctggggaatccgaggagaagatc
agagatctgtttgacaaagctgtgacttctgcaccgtgcattgtgttcattgatgaaatt
gacgccatttcaccaaaacgagagactgcctctaaagacatggagcgtcggattgtggcc
caactccttacctgtatggacgatcttggcagtaaaaccgattcccatgtgctggtgatt
ggcgcaactaacagacctgactcaatagatcctgctctcagaagggctggccgatttgac
agggaaatttgtcttggtataccagatgaaaaagccaggaaaagaatattgctagtgctg
tgtagagagctgaagctgactgagaactttgattttgactttctggccaaaaactctcct
gggtatgtgggggcagatcttatgtcccttgcaagagaggcatcaatgacagctgttaac
agagtgttccagaaactacaagccagtgatgggatacctggtacatccagtcaaaacact
gtcagtaaagtcgtacccagtgacatctccaaggaaggacaaacagacatctccataata
ggacaaactgacatatccactactggacaaacagaaccctccaaggagggagaaacagat
atctctaaggagaggcagacagaaatctcaaaggaagaacagacagacgtttccatggaa
atatgtacaaatgaatcgaccaatgatacaacagctaagcgagacacacagaaagaaatc
catgctgaattggaaacagtgttgagttggctgaaggaacatcctcccctgagtccacag
cagatggagaacctctacatcacaatggaagattttatggaagctctgaagtatgttcag
ccatcagccaagagagaaggctttgctaccatccctgatgtctcgtgggacgacattgga
gccctgcatactgttcgagaggatctacaacttgccatccttgcacctgttaaacattca
gaagccttcagtgaacttggattaaacagagcacagggaatcctgctggcgggacccccg
ggctgtgggaagacccttttggccaaggcagttgcgaatgaatctggtatcaactttatc
tctgtcaagggaccagagctcctgaacatgtacgtaggggagagcgagcgagcagtccga
caagtattccagcgggctaggaactcctcaccttgtgtcattttctttgatgaattggat
gccctttgtccacgtagaacagatggaggggagggtggctccagtgtacgagttgtgaac
caacttttgacggaaatggacggccttgaggagaggaagcaggtgtttatcatgggagcc
acaaacaggccagacataatagatcctgctgtcctgcgacctggaagactggacaagact
atctatgtggggcttcccaattcatctgaccgcctggatatcttgatgaccattacaaag
aagggaacgaagcccaagcttgaggaggatgtgaatttggaggatgtggccaatgaccca
agatgtcagcgttacacgggtgcagatttggcagcattggtgagggaggcttcagtttgt
gcattaaagacaatcatcaactctacagcagataataagccctccctcattgtcactaag
caacactttgaattggccttcacaagagttagaccgtccgtttcaacaaaggatcaagca
aaatatgagaaactgaaggaatctttatcatcagaatga
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