Pecten maximus (king scallop): 117323423
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Entry
117323423 CDS
T07399
Name
(RefSeq) DNA topoisomerase 3-alpha-like isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03440
Homologous recombination
pmax03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117323423
03460 Fanconi anemia pathway
117323423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmax03032
]
117323423
03400 DNA repair and recombination proteins [BR:
pmax03400
]
117323423
Enzymes [BR:
pmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
117323423
DNA replication proteins [BR:
pmax03032
]
Eukaryotic type
DNA Topoisomerases
117323423
DNA repair and recombination proteins [BR:
pmax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
117323423
FA (Fanconi anemia) pathway
117323423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-LITAF-like
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
117323423
NCBI-ProteinID:
XP_033734538
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Position
1:6717381..6777034
Genome browser
AA seq
1004 aa
AA seq
DB search
MLITICRTLCSSSKEKMVRILNVAEKNDAAKSIAAVMSRGSARKREGFSKFNKIYEYEYN
ILNHSNCTMTMTSVSGHLLGLDFVGNYKKWYSCNPVALFDVEVEKYCPQNFTDIKRTLER
EVRGVHALIIWTDCDREGENIGYEVIQVCKSVKPNLRVYRARFSEITPQAIQRACRNLVE
PDQNTSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPQVLSDQLISYGSCQFPTLGFVVER
YKQVQAFVPEPFWKIKVTHKQEESTIDFNWKRVRLFDNTACLVLYEHCTENPTATVKDVK
CKSKSKWRPQPLDTVELEKLASRKLRINAKETMKIAEKLYTEGYISYPRTETNKFPPDLD
LGRLVEQQTVDGVWGEFARQVLEQGPRPRNGSKTDQAHPPIHPTKYTDRLQGNEKRVYEF
IVRHFLATCSSDAQGQETIVEIDIAEEKFSAQGLMITARNYLEVYPYDRWNAKVIPVYSQ
GDSFQPNSIEMIESETSPPSLLSEADLIALMDKHGIGTDATHADHIETIKSRMYVGLQGD
NKFIPGHLGMGLVEGYDAMGYEMSKPHLRAELEADLTRICEGRKDKNVVLEEQKQKYKQV
FIEACRQALKIDEALAKYLGEAQPMPAEHALETLASSPIKKCPNCGQDMMLKTKKDGKGF
YIGCMGYPNCRNAVWLPDFVLEATAVDTSCQTCAGVRLIKFKFKRGSVPPMVPTEYCGCI
GGCDEMLSEALNLNRNMSSSQRPATLSNQTNLSDSGIGSTYNSQASGRTNNRPSQSTQRQ
NISTYNSSTNNNTQTGNGVQGGNSRVPLVSVSPFNRNTSAPAASGGNAIVCSCGDDALLL
TVRKEGPNTGRQFYKCGSSKCNFFLWADETPDIDGGGGGGGNTTHNRNTSTSGRGNHPPL
SGNSGGEECHCGNTAKKLSVQKDGPNKGRQFLACSKPRGEGCNFFQWVDEMGSNENTGGG
SEWNQRGDNKRRGGANSGGPVTKKARKCGLCGEEGHTRKTCPHK
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgttaataacaatttgcagaacactttgttcatcttccaaggaaaagatggtgaggata
ttgaatgttgcagaaaaaaatgatgccgccaagtcaatcgccgctgtcatgtcaagggga
agtgctcgaaagagggaaggattttccaaattcaacaagatttatgaatatgaatacaac
attctgaaccacagcaattgcaccatgaccatgacatctgtgtctggacatcttttagga
ctcgacttcgtaggcaactataagaaatggtatagctgtaatcctgttgcactgtttgat
gtggaagtggagaagtactgccctcaaaattttactgacatcaaaagaactctagaaagg
gaggtaagaggtgtgcatgctcttatcatctggacagactgtgaccgtgaaggggaaaac
attggatacgaagtcattcaagtttgtaaaagtgtaaaaccaaacctaagagtatacaga
gcaaggttttctgagatcacaccacaagccatacaaagagcctgtagaaacttagtggag
cctgaccagaataccagtgatgctgtggatgtccggcaggagctggacttaaggataggg
gctgcatttacaagattccagactttaagactacagaagatcttccctcaggttttatcg
gatcagctgatcagctatggaagttgtcagttccctacccttggttttgtggtcgaaagg
tacaaacaagttcaggcttttgtaccagagccattttggaaaattaaagttacccacaaa
caggaagagagtaccatagacttcaactggaaaagggtgcgtctgtttgacaacactgca
tgtctggttttgtatgagcactgtactgagaatcctacagcgacagtgaaggatgtcaaa
tgtaaaagtaagagcaagtggagacctcagccactggatactgtggaattggaaaagctt
gcctccagaaagttaaggatcaatgccaaggaaacaatgaaaatagcagaaaaattgtac
accgaaggatacataagttatccacgtaccgagaccaacaagtttcctcctgaccttgac
cttgggagactggtggagcaacagactgttgatggtgtttggggagaatttgcaaggcaa
gtgttagagcaaggaccacgtccacggaatggcagtaagactgatcaggcacatcccccc
attcaccccaccaagtacacggacaggcttcagggcaatgagaagagggtttatgaattc
attgttagacatttcctggcgacttgctccagtgacgctcaaggtcaggaaaccatcgtg
gaaatagatattgctgaggaaaagttttcagcccagggcctcatgattactgccagaaac
tacttagaagtgtacccttacgaccgctggaatgccaaggttattcctgtgtacagtcaa
ggggacagtttccagcctaactccattgagatgattgaatcagagaccagcccaccatct
ctcctgtcagaggcagatttgattgcattaatggacaaacatggaattggaacagatgct
acacatgctgatcatatagagaccatcaaaagtcgaatgtatgttggactacaaggggac
aacaaattcatccctggtcatctcggcatgggacttgttgagggttatgatgcaatgggg
tatgaaatgtccaaaccacatctcagggcagaattggaggcagatttaacaaggatttgt
gagggcagaaaggataaaaatgttgtcttagaagagcagaaacagaaatacaaacaagtg
ttcattgaagcatgtcggcaggccttaaagattgatgaagcgctggcaaagtatctcggg
gaggcccagcccatgcctgcagaacatgcattagaaacattagcctcatcgccaatcaaa
aaatgtccgaactgtggtcaggatatgatgttgaaaacaaagaaagatggaaagggcttc
tacataggctgtatgggctatcccaactgtaggaatgctgtttggctgccagactttgta
ctggaggcaacggctgtagacacatcttgtcagacatgtgctggagtacgcctgatcaag
ttcaagtttaaacgaggttctgtccctcctatggtgcctacagagtattgcggttgtatt
ggaggatgtgatgaaatgctgtccgaagccttgaatcttaacaggaacatgagttccagt
caaaggcctgctacattatctaaccagacaaatctatcagatagtggtataggttcaaca
tacaactcccaggccagtggtagaaccaacaacagaccatcacagtctacccagagacaa
aatatatcaacatacaacagtagtacgaacaacaatacccagacaggaaatggtgtacag
ggaggtaactctcgtgttcccctggtgtcagtgtcaccattcaacagaaatacatctgct
ccagcagctagtggcggtaatgctattgtatgttcctgtggagacgatgctttgttacta
acagtgcgcaaagagggacccaacacaggtcgacagttctataaatgtggatcatctaaa
tgtaacttttttctttgggctgatgagacacctgacattgatggaggagggggtggaggg
ggtaacaccactcacaacaggaataccagtacttctggtagaggtaatcatcccccacta
tcgggaaactcaggaggagaagaatgtcactgtggaaacacggctaaaaaattatcagta
caaaaggacggaccaaacaaagggagacaattcttggcatgcagtaaaccccgtggtgaa
ggttgtaatttcttccagtgggttgacgagatgggaagtaatgaaaatacaggtggtggt
agtgagtggaaccaaagaggtgataataaaagacgtggtggggctaacagtgggggacca
gttacaaagaaggcgaggaaatgtggcttatgtggagaggaaggccacacaagaaagacc
tgtccacacaagtga
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