Pecten maximus (king scallop): 117324054
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Entry
117324054 CDS
T07399
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2-like
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117324054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117324054
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117324054
U7-dependent histone pre-mRNA processing factors
117324054
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
SRP54
Motif
Other DBs
NCBI-GeneID:
117324054
NCBI-ProteinID:
XP_033735558
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Position
3:complement(36880798..37154091)
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AA seq
765 aa
AA seq
DB search
MTSIVKLQAFSGAHNESPPCYMLQVDEFRFLLDCGWDEDFNLDFIKELKRHTHQIDAVLL
SYPDHIHLGALPYMVGKAGMNCPIYATIPVYKMGQMFMYDLYQSRHNTEDFEIFSLDDVD
CAFDKIHQLKYSQTVHMKGKGHGLQITPLPAGHMIGGTIWKIVKDGEEEIIYAADYNHKK
ERHLNGCVLESISRPSLMITDAFNATYIQSRRRTRDEQLMTTILQTMRNDGNVLVAVDTA
GRMLELAQLLDQMWRTSESGLSPYSLALLNNVSFNVVEFAKSQVEWMSDKIMRAFEENRN
NPFHFKHVKLCHNLAELSRIPEPKVVLSSVPDLQCGFSRDLFVAWCGSAKNSIILTNRTS
PGTLARQLIDNPENKTVTMEIRRRIKLEGAELEDYLKKKQEKEAEMARVKNEQDNDLDDE
SSDESEAEMDIDTYASGTKGKHDLMMKGEGKSRTGFFKQAKKAYPMFPYTEEKIKWDEYG
EIIRPEDYTILEVPVQDEEMTMDSVAREVESMQEVSEVPTKCVSATVTLDINANIQYIDF
EGRSDGESIKKILSQIKPRQLILVRAVTEATESLADYCRKLEGMVQGKVFSPKVGEIVDV
TRESHIYQVRLRDYVVSALDFQKAKDTELAWIEGMLDMSQGKTDTSPMFELEEGELSEEA
REKRLQQEKEDEEEKAMDIVPTLESVQPHQIEGHKAVFVNEPKLSDFKLILLQEGFQAEF
IAGVLICNSSVAVKRNEAGKIQLEGSICEDFYKIRELLYNQYAIV
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattgttaaactccaagccttctctggtgctcacaatgaatctccgccatgc
tatatgttacaagtggatgaattccgatttcttcttgactgtggatgggatgaggatttt
aatcttgactttatcaaagaattaaaaagacacacccaccaaattgatgctgtactgctt
agttatccggatcatatccatttaggagccctgccatatatggtcgggaaggccggaatg
aattgtcctatatatgccactattccagtgtataaaatgggacagatgtttatgtatgat
ctctaccagtcgagacataacacagaagattttgaaatattcagcctggatgatgttgat
tgtgcatttgataaaatccaccagcttaaatattcacaaactgtacacatgaaaggtaaa
ggtcacggcctacagataacccctctgcctgctggacatatgataggaggcactatatgg
aagattgtcaaagatggagaggaggaaattatatacgctgctgactacaatcacaaaaaa
gaaaggcatttaaatggctgtgtcctggagtccatatcacgaccttccttgatgatcact
gatgccttcaatgctacatatatccagtctcgtagacgcaccagagacgaacagctcatg
acaaccattttacaaacaatgaggaatgatgggaatgtgttggttgccgtggatacagct
ggcagaatgctggagctagcacagttactggaccagatgtggaggacatcagaatcaggc
ctgtcaccatactccctggcgctcctcaacaatgtcagcttcaatgtcgtcgagtttgcc
aagtctcaggtggagtggatgagtgacaaaatcatgagagcgtttgaagagaacaggaac
aacccattccattttaaacatgtaaagctgtgtcataacctggcggaactttccagaatt
ccagagccaaaggtggtgctatccagtgttccagatctacaatgtggcttctctcgagat
ctttttgtggcatggtgtggcagcgccaagaacagtattatcctgaccaatcgcacgtct
cccggcactctggcccgacaactcatcgacaacccagaaaacaagacagtcactatggag
ataagaagaagaatcaagctagaaggagctgaactagaggactacctgaaaaagaagcaa
gaaaaggaagctgagatggcgagagtgaagaatgagcaggataatgaccttgatgatgag
tcgagtgatgagagcgaggctgagatggacattgatacatatgcctctgggaccaaagga
aaacatgatcttatgatgaaaggcgaaggtaaaagcagaacaggattttttaagcaagct
aagaaggcctatcccatgttcccgtatacagaggagaagatcaagtgggacgagtatgga
gaaatcatcaggcccgaggactacactatattagaagtacctgttcaagatgaagaaatg
accatggacagtgtggcgcgggaggtggaatcaatgcaagaagtgtcggaggtacccacc
aagtgtgtgtctgccacggtcacactcgacatcaatgccaacatacaatacattgacttt
gagggtcggtctgatggagagtccatcaaaaaaatcctcagccagatcaaacctagacaa
ctgatacttgttcgagctgtgacggaggctacagagtccctagcagactactgtcgtaaa
cttgagggaatggtccagggcaaggtcttctctcctaaagtgggcgagatcgtggatgtg
accagagagagccacatctaccaggtcagacttagagactatgtggtcagtgcactggac
ttccagaaggctaaagacacagaactggcctggattgagggcatgctggacatgagtcag
gggaagactgataccagcccaatgttcgagctggaggaaggcgagctgtccgaggaggca
agagaaaagaggctgcagcaagagaaagaggatgaggaggagaaggctatggatatagta
cctaccctggagtcagtccagcctcaccagatcgaggggcacaaagcagtatttgtcaat
gaaccaaagctctctgattttaaactgattctgctacaggaaggctttcaggccgagttt
attgctggagtgctcatctgtaacagtagtgtggctgtgaaaaggaatgaagcagggaaa
atccagctggagggatctatatgtgaagacttttacaaaatacgggagctactgtataac
cagtatgccatcgtgtag
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