Pecten maximus (king scallop): 117325116
Help
Entry
117325116 CDS
T07399
Name
(RefSeq) nucleoporin NDC1-like
KO
K14315
nucleoporin NDC1
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117325116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117325116
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117325116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
CF222
Motif
Other DBs
NCBI-GeneID:
117325116
NCBI-ProteinID:
XP_033736959
LinkDB
All DBs
Position
4:7919179..7937738
Genome browser
AA seq
572 aa
AA seq
DB search
MESLDSWYRREVYSWRTGAAVGWTLLLQPCVLAVYLVFCTLDICHPLSWIAGSFSMLFST
HYMFVMLVLTLVSGVLGVVMSSSYTVVPDIPLTRLHGLVQLLLPTRLLRCLMYLVSGAVT
AWVCTSCIGDRYTSLIKSDGTDREVYYLNEYHLFLVVYGMYSGVLYNITMYIHQNNLVQF
PVLEQAKFFQVRSRLYNELLKSLSYSLWHTAYFYPFYWMFGHIPKDFVLQHTSLLGSEIP
LNSVWGLLDVFLLYQTILCGVFLYLTWTVSSVLYKIYNTEHYAFPVEDVFDDQKNKCLVD
ALSCKTNSLLQCLGFYDVCHLSRKSGVRRSVVFSLSQPGGHPHNWNKLYSACVAEVNALN
QKVQEANWKVFASVPVRQAAGEKNIPPASAGEITTTTLSYRGATTMTNGNSSSPPVDKPA
SNLQTFKDLTLMYLKKKPVFSYFLSELPDSKSRKLFATCQVQVWAVEALSNFATASYTDD
KYGVVQRSLPEIITAVVNLQENVEKHFKLATTTSRRNQKDLGHYDTQLGYLLQTTLKSSM
YKIVNTFGKHILSLNLSPECVRKLKLFMDYKE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggagtctttggatagttggtatagacgagaggtgtacagttggcgtacaggagctgct
gtgggttggaccctgctgctacaaccctgtgttttggctgtgtatctcgtcttttgtaca
ctggatatttgtcaccctctgtcatggatagcaggttccttttcaatgctgttttccaca
cattacatgtttgtgatgttggtgcttacacttgtgtccggagtgctgggtgtagtgatg
tcatcctcttatacagtggttcctgacattcctttgactcgtctacatggcctagtccag
ctcttactgcccacacgtctactacggtgcctgatgtatcttgtgtctggggcagtgaca
gcctgggtctgcacctcctgcataggcgatcgctacacctccctcattaaatcagacggt
actgacagagaagtgtattacctgaatgagtaccacttattcttagttgtgtatggtatg
tacagtggggtcctgtacaacatcaccatgtacatacatcagaacaacctcgtacagttc
cccgtcctggagcaagccaagtttttccaagtgagaagtagactctacaatgaacttttg
aagtcactctcttattccctgtggcacacagcatatttctaccctttctactggatgttt
ggtcacatccctaaagactttgttttacaacacacatccttacttggttctgagattcct
ctgaactctgtgtggggccttttagatgtgtttctcctgtaccagacaatcctgtgtggt
gtatttctctacctcacttggactgttagtagcgtgctctacaagatctacaacacagag
cattatgcgtttcctgtggaagatgtctttgatgatcagaaaaacaaatgcctggttgat
gcactgtcttgtaaaactaacagtttactgcagtgcctgggattctatgatgtgtgccac
ttgtccagaaagtctggtgtgagaaggagtgttgtgttcagtctgagtcagccaggtggt
catcctcacaactggaacaagttatattcagcttgtgtagctgaggttaatgccctcaac
cagaaagtacaagaagccaactggaaggtgtttgctagtgttcctgtaagacaagccgct
ggtgagaaaaacatccctccagcatcagcaggggagataactacaacaaccttatcctac
cgtggagctacaaccatgactaatggtaactcctctagtccacctgttgataaaccagcc
tctaacctacagaccttcaaggatttgacacttatgtatctaaagaagaagccagttttc
agttacttcttgtcagagttgcctgattctaaaagcaggaagctttttgccacatgtcaa
gtacaagtttgggcagttgaagccttatccaactttgcaacagcctcttatactgatgat
aaatatggagttgttcaacgatccttaccagaaattataactgcagttgtcaatttacag
gagaatgtagaaaaacatttcaaactggccacaacaacaagtcgtcggaatcagaaagac
ttgggacattacgacactcagctaggatatctgctacagacaactctgaaaagctccatg
tacaaaatagtcaacacttttggaaaacatattttgagtcttaatctttctccagaatgt
gtgaggaagctgaaattatttatggattataaggaataa
DBGET
integrated database retrieval system