Pecten maximus (king scallop): 117325356
Help
Entry
117325356 CDS
T07399
Name
(RefSeq) mRNA export factor-like
KO
K14298
mRNA export factor
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117325356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117325356
03036 Chromosome and associated proteins [BR:
pmax03036
]
117325356
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117325356
Chromosome and associated proteins [BR:
pmax03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117325356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Nup120_160
Beta-prop_ACSF4
NBCH_WD40
eIF2A
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_WDR75_2nd
Beta-prop_CGLA
Motif
Other DBs
NCBI-GeneID:
117325356
NCBI-ProteinID:
XP_033737405
LinkDB
All DBs
Position
4:15716858..15727332
Genome browser
AA seq
360 aa
AA seq
DB search
MSIFGANNSFGNTASTNSNAMKDIEVASPPDDSVSCLKFSPGTMVQTFLVAGSWDNNIRC
WEVQQTGQTVPKAQQTHQGPILDCDWSDDGTKVFTASCDKTAKMWDLNSNQAIQIAQHDA
PIKTIHHIKAPNYSCVMTGSWDKTLKFWDTRQPTPIDSIQLPERCYCADVKYPMAVVGTA
ERGLIVYQLENRPQEFSRIESPLKFQHRCLSIFADKKTNAPTGFALGSIEGRVAIHYINP
TSPKDNFTFKCHRSNGTTNGMQDIYTVNDISFHPTHGTLATVGSDCRFSFWDKDARTKLK
TSEQFDQPLTACNFNAQGNVFAYATSYDWSKGHEGFDPQKKPHIFLRPGFDDLKPSMKKS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatttggggcaaataattcatttggcaatacagcttccaccaattccaatgca
atgaaggatattgaggtcgcatcacctcctgatgacagcgtcagctgtcttaagttcagt
ccagggacaatggttcagaccttccttgtagcaggtagctgggataacaatattcggtgt
tgggaggtgcagcagaccggacagacagtccctaaggcccagcagacacaccagggacca
atccttgactgtgactggagtgatgatggaacaaaagtattcacagcttcatgtgacaag
acagcaaaaatgtgggatttgaatagtaaccaggccatacagattgcacagcatgatgcc
cccatcaaaactatccatcacatcaaggcacccaactacagctgtgtaatgacaggcagc
tgggacaaaactctaaagttttgggacacccgacagcctactcctattgactcgatacag
ttaccagagagatgctactgtgctgatgtgaaatacccaatggctgtggttggaactgct
gagagagggcttattgtttaccagctagagaacagacctcaagaattcagccgcatcgag
tcaccattgaaatttcagcatcgatgtttgagtatttttgccgacaagaaaacaaatgct
cctacaggatttgccttgggaagcattgagggaagggtagcaatacattacatcaacccg
acaagtcctaaagataacttcaccttcaaatgtcaccggtccaatggaaccaccaacggc
atgcaggatatttacacggtgaatgacatttcattccatcctacccacggcacactggcg
acggttggatccgattgtagatttagtttctgggacaaagatgcacgtacaaaactcaag
acttctgaacagtttgatcagccattaactgcttgtaacttcaatgcacaggggaatgtg
tttgcctatgcaacaagttacgactggtcaaagggccatgagggatttgatccacagaag
aaacctcatatctttttgcggccaggatttgatgaccttaagcccagcatgaagaaatca
taa
DBGET
integrated database retrieval system