Pecten maximus (king scallop): 117325566
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Entry
117325566 CDS
T07399
Name
(RefSeq) helicase with zinc finger domain 2-like isoform X1
KO
K25165
3'-5' exoribonuclease HELZ2 [EC:
3.1.13.1
5.6.2.6
]
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117325566
Enzymes [BR:
pmax01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
117325566
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117325566
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117325566
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
AAA_12
AAA_11
OB_HELZ2
AAA_30
AAA_19
UvrD_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
117325566
NCBI-ProteinID:
XP_033737770
LinkDB
All DBs
Position
4:complement(24027228..24068401)
Genome browser
AA seq
2692 aa
AA seq
DB search
MEHRYSKDVITKPEHRQTKDETAAGASATHKKEPTREQQGSDDTQGDNSGSISIPLEHGN
MSTVHVDPSQKTLNTLRKGEPVSGRKKRKRKKKSTKIVQSSELQVENPGTATNAIPMDPY
KVIPNQESLDSERHVKTSEVEHITVNEIDTSHNEHKSESQAKNSSPTSNESIVGEGGAIH
TDPSQETLDTAKDVGQTSHSITIIYDRELTVEKHENDDIQEMHPSVPITNHNDKSTEEQK
GSSVNRLPEDEPIPERRQTKSKRRRKKTKMDQTTETQAERPSPATNVFSMDHCKVVEEPN
TENKIRTSNTEQTSESEVKTSSCTSNVSTLGQGDAIHKDPSQETLDSGRNEEPVPEHKKK
KSRKKKKRTKNEHTSELQDGQVATLTSVTVTKDGESNGKSCEPGVEKPGPTSNASTAGQG
DAIHTDPRKEKLETAKHVGPTSHSITIIYDRELTVENHENDDIQEMHPSVPITNHNDKST
EEQKGSSVNRLPEDEPIPERRQTKSKRRRKKTKMDQTTETQAERPSPATNVFSMDHCKVV
EEPNTENKIRTSNTEQTSESEVKTSSCTSNVSTLGQGDAIHKDPSQETLDSGRNEEPVPE
HKKKKSRKKKKRTKNEHTSELQDGQVATLTSVTVTKDGESNGESCEPGVEKPGPTSNAST
VGQGDAIHTDTSQEKLDTAKHVGPTSHSVTIIYDRELTVEKHENDDIQEMPQSVPITNHN
GESTEEQKGSSVNRLTEDEHIPERRKRKSKRRRKKTNMDQTTETQVKTSSSASNVSTPVQ
GDVIHTDPSQETLDSGRNVSPTSHDRELTMEQQENGDIQETSSSISITNHTGESTEEQQG
CGINRENNESKDVKTCNNNNNNNNKVRKTTSETKGRSYADCVKTGKIKHKVPKHNRGHVD
ITEQYPVEGKLYSTTAESDVESISSFQFDDEEGDLVNSDMEKNEESDIYIGDDTETWFEK
SRRKYDFPKDDSGLFEDDVLDNSILTDGVELTDVYMEKFTRQSFSLKRDNFYGFKSEREC
MELCKSNPNLYVCCQLEIQSPHRAVATLLNPRKNLERIEILGRFKCGQAFTADEVVVEIL
QKVNRAKDTSGREKDKKTLDAYGKVIGIIERVRHKDIEHPVFIATQDPNAGHLMLPICKT
IPKISVLNKNIKERYPTQMMHKVEVYDYVASKGILQYKESQDIKPDERDQYRFLVCYLHW
GEKYVYPRGAVIALMKTDVNDIRRGLRIIGIQNQVPTHYNESTIGAVQRLIENSQETANS
NRLDLTDKINAFTIDPPHSKDLDDALSVEDVGSDTYLIGVHISDVTAAIPLDSDIDKEAR
SRCSTYYSIPRARNMHMLPEPLSQDMLSLLPNTKRAAISVFFTVNKYGVIEETRDIRRTF
IRSSKRLTYQEVQAIIDETALSSDRLHRDIRCLNELAQHIRRDRLKGALHAYPVEFDFSV
DTNDILHNIDAHNLVEEFMIMANHSVGRYLVNAYSDVVPLRCQSNPESDALSSWLSKNTH
IADIIVALQDLKLNTSSVTRTLSISNAPKSRWNRLLPIQNWVWKAIVNAAERNDIGRVKQ
LIGSDDLHPQQSFALQEWMSFQETASYKCSGSDGLSKSGGHHFSLGLDNYVHFTSPIRRY
VDIVIHRLLHAALDGLDKLPYTKEDIDDICDQMNQARNRAKIFQKQCDMLLLSTKLRRCP
QKLVGFVEDMSDEGVTLHFPGLKHVPVQKRMLKFNLLYLNSQPQRSEDVDLIPNTSEKRE
LISVKWHRRIYLHRGVKRKQQNDEDKESDNSTVKSVDPHQRTKFLKYTAWVEILTALLDR
NNDILIQVIDETETDGKFGALRKYVQSSLKAVQDVSCENQTSVFVNPICKFKLPFHLNQT
VAVHMTAEYDRGTLYPYIQVFDMTPNVSFCLQHVDNPVKVLARYSTVPSKLEYKDVQNYI
KSWLPIIQMEAATNTVRNEESATICGVPIQFRGRNGKFYLNTHYCKMREIEFGNTELEIF
KEDTEEVTRGNRVNDAKKKELLKEIVCSNYVCIRCPVRGNEQKKQSQSAQGRITDEKRIW
IGHGEFTHKRSVKVEKFGHCFEVHFKLHEDNAPAPMKVAEISDGCSLEILSKSKVDRRTE
SLMKLLPEATSLARAIALAKRIPVLDDLHEEIAKEIPRDIEIDSLPRNNHQQNNAIENAL
TSRFSLIQGPPGTGKTFTGIKLIYLFNLFNRKFYEKTHERRYLVFSGPSNKSVDLVANQV
LQRLSQSDLAPRIIRMYGQAYEFLDFPVPGKISCSHRSIRDSKPDEALKGKGVVLHHVIR
ESGKTYADELRSFDRKFKAESYTASIEEIDKYQEILSKATQEELQNYDVILCTTSMAGNP
KLLKATKGKVYQCIIDECGMCTEPECMVPPIATRAEQVVLIGDHKQLQPIILCKEAGELG
LATSLFERYAKLRKKMEKLNMKYTMLVWQYRMNPKICEFPSRRFYDGKLKTANSKYWIVD
QPLRIWKNTNRNKHEFSNKPNSDKDNSSEICKKSNTNEHIPLVFCHIEGSEEVLTVSTEE
GNERSRKNKEEADHVAKVFKYLRDVEKVNTNYIQIITQYNAQRHAIQETLTKENIINIKI
NTVVKSQGSEWDYVIFSTVRSLPRYLIEHNPTIGWCRQNLGFITDQHQINVALTRARKGL
IIIGNKHLLRCDEVWRDLIRKYEDEDLVYTPQQFPPSPRRRRDRPTRPPRLK
NT seq
8079 nt
NT seq
+upstream
nt +downstream
nt
atggaacacagatattctaaagatgtaatcacaaaacctgaacatcgacagaccaaggat
gagactgcagctggtgcttcggccactcacaaaaaagagccgacaagagaacagcagggc
agtgatgatacacagggagataactccggttccatttcgataccattagaacatggcaac
atgtcaacagtacacgtggatccaagccagaagacattgaacacgttgagaaagggtgaa
cctgtctctggacgtaagaaaaggaaaagaaagaaaaagagtacaaaaatagtgcaatcg
tctgagttacaggtggagaatccagggactgcaaccaatgcaatccctatggatccttat
aaagtcataccaaatcaagaatcattagactcggaaagacatgtaaagacatcagaagta
gaacatatcactgtaaatgagatagatacatcacacaatgaacacaagtccgagtcccag
gccaaaaattccagtcctacctccaatgaatctatagtgggagagggcggtgccatacat
acagatccaagccaggaaacactagatactgcaaaagatgttggtcagacttcacatagt
atcacgattatctacgaccgagagttaacagtggaaaagcacgaaaatgatgacatacag
gagatgcacccgtctgttcccattactaatcacaatgacaagtcaacggaggaacaaaaa
ggcagcagtgttaacagattacctgaggatgaacctatccctgaacgaagacaaacgaaa
tcgaaaagaaggagaaagaagacaaagatggatcaaacaactgagacacaagcggagaga
cctagtcctgcaaccaatgtgttctccatggatcattgcaaagtcgtggaagaaccaaac
accgagaataagataaggacatcaaacacagaacaaacttccgagtccgaggtcaagacc
tccagctgtacctcaaatgtatctactctgggacagggcgatgccatacataaagatccc
agccaggaaacactagactctggaagaaatgaagaacctgtccctgagcacaagaaaaag
aaatctagaaagaagaaaaagaggacaaaaaatgaacatacatctgagttacaggatggc
caggtggcgactctaacaagtgttaccgttacgaaggacggagaatcgaatggaaaaagt
tgcgaaccaggggtcgaaaagcccggtcctacctcaaatgcatctacagcgggacagggc
gatgccatacatacagatcccaggaaggaaaaactagagactgcaaagcatgttggtccg
acttcacatagtatcacgattatctacgaccgagagttaacagtggaaaatcacgaaaat
gatgacatacaggagatgcacccgtctgttcccattactaatcacaatgacaagtcaacg
gaggaacaaaaaggcagcagtgttaacagattacctgaggatgaacctatccctgaacga
agacaaacgaaatcgaaaagaaggagaaagaagacaaagatggatcaaacaactgagaca
caagcggagagacctagtcctgcaaccaatgtgttctccatggatcattgcaaagtcgtg
gaagaaccaaacaccgagaataagataaggacatcaaacacagaacaaacttccgagtcc
gaggtcaagacctccagctgtacctcaaatgtatctactctgggacagggcgatgccata
cataaagatcccagccaggaaacactagactctggaagaaatgaagaacctgtccctgag
cacaagaaaaagaaatctagaaagaagaaaaagaggacaaaaaatgaacatacatctgag
ttacaggatggccaggtggcgactctaacaagtgttaccgttaccaaggacggagaatcg
aatggagaaagttgcgaaccaggggtcgaaaagcccggtcctacctcaaatgcatctaca
gtgggacagggcgatgccatacatacagataccagccaggaaaaactagacactgcaaag
catgttggtccgacttcacatagtgtcacgattatctacgaccgagagttaacagtggaa
aagcacgaaaatgatgacatacaagagatgccccagtctgttcccattactaatcacaat
ggcgagtcaacagaggaacaaaaaggcagcagtgttaacagattaacagaggatgaacat
atccctgaacgaagaaaaaggaaatccaaaagaaggagaaagaagacaaacatggatcaa
acaactgagacacaagtcaagacgtctagctccgcctccaatgtatctactccggtacaa
ggtgatgtcatacatacagatcccagccaggaaacactagattctggaagaaatgttagt
ccgacttcccacgaccgagagttaactatggaacagcaggaaaacggtgatatacaagag
acgtcttcgtctatttccattaccaatcacactggcgagtcgacagaggaacaacaggga
tgcggtattaacagggaaaacaatgaatctaaggatgtcaaaacatgcaacaacaacaac
aacaacaacaacaaggtccggaaaacaacgtcagagaccaaagggaggagttacgctgat
tgtgtgaagacaggtaagataaaacataaagtaccaaaacacaacagaggtcatgtagat
attactgaacaatatccggtcgaaggaaagttatattctacgacagccgagtccgatgta
gaatcgatttcttcatttcaattcgatgatgaggaaggcgacttagtcaacagtgacatg
gaaaaaaacgaagaatcagacatttacatcggagatgatactgagacatggtttgaaaaa
agtcgcagaaaatatgattttccaaaagatgattctggattatttgaggatgatgtactt
gacaacagtattctgacagacggagtcgaactaacagatgtttacatggaaaaatttacg
agacagtctttctcgttaaaaagagacaatttctatggttttaagtctgaaagagagtgc
atggagctatgtaaatctaatcctaacctttacgtatgttgtcaacttgaaatacaatcg
cctcaccgtgcagtggcaacactattaaatcctagaaaaaacctagagagaatagaaatt
ttaggtagatttaaatgtggacaggcatttacagcagatgaggttgtagttgaaatactc
caaaaggtaaaccgtgcgaaagacacatctggtcgtgaaaaagataagaaaactttggat
gcctacgggaaggtcatagggatcattgagcgtgtaagacataaagatatcgagcatcct
gttttcattgcaacacaagatccaaatgctggtcacttgatgttaccaatttgcaagacg
ataccgaaaatcagcgtactaaataaaaacataaaagaacgctaccccacacagatgatg
cataaagtggaagtttatgattatgttgcatctaaaggtatactgcaatataaagaaagt
caagatataaaaccagacgagagagatcaatacaggtttcttgtttgttacctacactgg
ggagagaaatatgtgtatccacgtggagcggtcatagctttaatgaaaacagacgtgaat
gatattaggagaggattacgcataattggcattcaaaaccaagtacctacccattacaac
gaatctactatcggagcggtacaacgcttgattgaaaactcccaagaaacagcaaatagt
aatcggttagacctcaccgataaaatcaatgcctttaccatagatccaccgcattccaag
gatttggacgatgcgctaagtgttgaggacgttggaagtgacacatacttgattggtgtt
cacatttccgatgtaactgccgcaatccctttggatagcgacattgacaaagaagcacga
tctagatgttctacttactactcgatcccaagggctagaaatatgcatatgctaccagag
ccactcagtcaggatatgcttagtcttcttcccaatacaaaacgtgctgcaatctcagta
ttcttcaccgtaaacaaatatggtgttatagaagaaaccagagacattcgacgtactttt
atacggtctagtaaacgtctaacatatcaagaagtccaagctatcattgacgagacggcc
ctttcatctgatcgtcttcatcgagatatcagatgtttgaacgagctagcacagcacatt
cgccgtgaccgtttgaaaggagccctgcatgcataccctgtagaatttgacttttcagtc
gacacaaacgacattctacacaatatagatgctcacaatttagtggaagaattcatgatc
atggcaaaccatagtgttggtcgatacctcgtgaatgcatatagtgatgtcgttccttta
agatgtcagagcaatcctgaaagtgacgccctctcttcatggttgagtaaaaacactcat
atagcggacatcatcgtagcattgcaggatttgaaacttaatacatcctcggtcaccaga
acattgagcatttcaaacgctcccaagtctagatggaatcgtttattgcctattcaaaac
tgggtgtggaaggctattgtcaatgcagctgaaagaaatgatataggacgcgtaaagcag
ctgatcggaagtgatgacctacaccctcaacaaagttttgcccttcaagaatggatgtct
ttccaggaaactgccagttacaaatgttcaggatccgatggtttatcaaaatcaggagga
catcacttttcgctaggtcttgataactatgttcatttcacttctcctatcagaagatat
gttgacattgtaatccacaggcttctgcatgcagctttagatggcttagacaagctacct
tatacaaaagaagacatagatgacatttgtgatcaaatgaatcaggcacgcaaccgagcg
aagatatttcagaagcaatgcgacatgttgctcctctcaacaaaactaaggagatgtccg
caaaagttagtaggttttgtcgaagacatgtctgatgaaggagtgaccttgcattttccc
ggattgaaacatgttccagtgcagaaaagaatgctcaaattcaatcttttatacttaaat
tcgcaaccacaacgcagtgaggatgtagatctcattcccaacacaagtgagaagcgagag
ctaatctcggtcaaatggcatagacgtatttatctccacagaggtgtaaaaagaaagcaa
cagaatgacgaagataaagaaagcgataattcgactgtaaagagtgttgacccacaccaa
cggacaaaattcctcaaatatacagcttgggttgaaatattgactgcgcttcttgacaga
aataacgatatcctcattcaggttatcgatgaaacagaaaccgatggcaaatttggagca
ttgcgcaaatatgtccagtcaagtctgaaagctgtacaggacgtaagctgtgagaatcaa
acaagtgtgtttgtcaatccgatatgcaaattcaaacttccatttcacctcaaccagaca
gtcgctgtgcatatgacagcagagtacgacagaggtacattatatccatatatacaggta
tttgacatgactccaaatgtgtcgttttgcttacagcacgtagataaccctgtaaaagtc
ctagcaagatattcaactgtgccttcaaagctcgaatacaaagatgtacaaaactatatc
aagtcatggttacccatcattcaaatggaagcagcaacaaatactgtgagaaatgaagaa
tcggctacaatatgtggtgtaccaatacagtttcgaggaagaaatggtaaattctatctc
aatacccattactgcaaaatgagggaaatagagtttggaaacacagagttagagatcttc
aaagaggatacagaggaagttacacgtggcaatcgtgtcaatgatgctaagaagaaagag
ctgttgaaggaaattgtatgttccaattacgtttgtattcgttgtccagttcgtgggaat
gagcaaaaaaagcaaagtcaatccgcccaaggcagaattactgacgagaagaggatttgg
attggccatggcgaatttacacataagagatcagtaaaagtagagaaatttggacattgc
tttgaagttcattttaagctgcatgaagacaacgcacctgcaccaatgaaagttgctgaa
atttcggacggatgtagcttggaaatactaagcaaatccaaagttgacaggcgaacagaa
agtctgatgaagttacttccagaagcgaccagtttagcccgggccattgctcttgcgaaa
cgaattccggttttagatgatcttcatgaagaaattgcaaaagaaatcccaagagatatc
gaaatagattcgttgccaagaaataaccaccagcagaacaatgccatcgagaatgccctc
acatctcgtttcagtttgattcaaggtcctccaggcactggaaaaactttcacagggatt
aaactcatctaccttttcaaccttttcaaccgaaagttttacgagaagacgcatgaaagg
cgatacctcgtcttttctggcccatcaaacaaatcggttgaccttgtagcaaaccaagtc
cttcaaagattgtctcaatccgatctcgctccaaggataatccgaatgtacggccaggca
tacgaattcctcgattttccagttccaggaaagataagttgttcccaccggtcgatacgt
gactctaaacctgacgaggctctaaaaggaaaaggtgtagttctccatcatgtcatacgg
gagagtgggaaaacttacgctgatgaattaaggtcgtttgatagaaaatttaaagctgaa
tcatatacagcatcaattgaagaaattgacaaatatcaggaaattctaagcaaagcaacc
caagaagagctacagaattatgatgttatcttatgcactacttctatggctgggaatcca
aagctgttgaaggcgacaaagggtaaagtataccaatgtatcattgacgaatgtggcatg
tgtacagagccagagtgtatggtaccacctatagcgacacgagccgaacaagtggtgttg
ataggagatcataagcaactccagccgataattctatgcaaggaggctggggaattggga
ctagcgacgtcattgtttgaacggtatgcaaagctgagaaagaaaatggagaagttgaat
atgaaatataccatgcttgtgtggcaatacaggatgaaccctaagatatgcgaatttccg
tcgcggagattttacgacgggaaattaaaaacagcaaattctaaatactggattgtggat
caacctttgcgaatttggaaaaacacaaatcgtaacaaacacgaattctcgaacaagcca
aacagtgacaaagacaattcttcggagatctgtaagaaatcaaataccaatgagcacata
ccactggtattctgtcacatcgagggctctgaggaggtgctgactgtgtccacagaggag
ggcaacgaaaggtccaggaagaacaaggaagaagcagaccatgtcgctaaagtgttcaag
tatttgagggatgttgaaaaggttaatactaactacatccagatcatcacccagtacaac
gcccagcgtcatgctattcaggagaccttgacaaaggaaaatattatcaacatcaagata
aacactgttgtcaagagtcaaggaagtgaatgggactacgtaatattcagcacggttcgg
tctttgccaagatatctgatagagcataaccctaccattggctggtgccgtcaaaacttg
ggcttcatcaccgaccagcatcagattaacgtcgcacttactcgcgcacgtaaaggacta
attatcattggaaacaaacacctgttgcggtgtgacgaggtttggagagacctaatcagg
aagtatgaggatgaggacttagtgtacacaccgcagcagttcccaccatctcctcgacgt
cgacgcgaccggccgacacgcccaccaagactaaaataa
DBGET
integrated database retrieval system
