Pecten maximus (king scallop): 117325701
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Entry
117325701 CDS
T07399
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
KO
K10839
UV excision repair protein RAD23
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03420
Nucleotide excision repair
pmax04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117325701
09124 Replication and repair
03420 Nucleotide excision repair
117325701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pmax03051
]
117325701
03400 DNA repair and recombination proteins [BR:
pmax03400
]
117325701
Proteasome [BR:
pmax03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
117325701
DNA repair and recombination proteins [BR:
pmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
117325701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Rad60-SLD_2
Crinkler
CFAP298
UBA_9
UBA_RAD5A
New_glue
Motif
Other DBs
NCBI-GeneID:
117325701
NCBI-ProteinID:
XP_033738013
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Position
4:complement(27861410..27870667)
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AA seq
390 aa
AA seq
DB search
MLITVKTLQQQSFKVEVDPEELVKVLKEKIEAEKGKEGFPASGQKLIYAGKILEDDKKVA
DYKIDAEKSFLVVMVTKPKAATPAAKPAETVTAPPPALVVESTPPAPPVEQPKPEQEKME
DKPTSPPAATATTTTASATESTASTTESSTATASVSAESTLVTGQAYENMVAEIVGMGFE
RERVVQALRTSFNNPDRAVEYLLTGIPEFPAEPPAPVPPAPTQSAPATAPAPATTSSGNV
TANPTQGEEDTLAFLRTQPQFNHMRRLIHQNPSLLPQLLQQIGQSNPQLLQLISRNQERF
IEMLNEPIGEEEQQAEGGGMPGVGGAPGANPMGQGYVQVTPQEKEAIERLKALGFGEGMC
IQAYFACERNEELAANFLLSQNFDDDDQQS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgttgattacagtaaaaactctgcagcaacagagcttcaaagttgaagtggatccagaa
gaattggtcaaggtcctcaaagaaaaaatagaggcagaaaaaggcaaagaaggatttcct
gcaagtggacagaaactgatatatgcaggaaaaattttggaagatgacaagaaagttgca
gattacaaaattgatgcagagaagagtttcttggttgttatggtgacaaagccaaaagca
gcaacacctgctgccaaacctgctgagactgttactgcgcctcccccagcactggttgta
gaatcgacacccccagcaccacctgtagaacaaccaaagccagagcaagagaaaatggag
gataaacctaccagccctcctgctgctaccgctaccacaacaacagcatcggcaacagaa
agtacagccagtacgacagagagcagcacagctactgcatctgtgtcggcagaaagcaca
ctagttacaggccaggcttatgaaaacatggttgcagagatcgtcggtatgggttttgaa
agggaacgggtcgtgcaagcgttaagaaccagttttaataatcctgacagagctgtggaa
tacctgcttacaggtattcctgaattcccagcggaacctccagcaccagttcctcctgct
ccaacgcagtcggccccagccacagctcccgcaccagccacaacctcgtcagggaacgtc
actgcaaacccaacacaaggagaggaagataccttggcattccttagaacacaacctcag
tttaatcacatgcgaaggcttattcatcaaaacccttctcttcttcctcaacttttacaa
caaataggtcaatcaaatccccaattattacagcttattagcagaaatcaagaacgattt
attgagatgttaaatgaaccaattggtgaagaagaacagcaggctgaaggtggtggcatg
ccaggtgtaggaggagcaccaggagctaatcccatgggtcagggatatgttcaagtcaca
ccacaggaaaaagaagcaatagaaagattaaaagcattgggtttcggagaaggaatgtgt
attcaggcatactttgcctgtgagagaaatgaagaattagctgccaattttctattgtcc
caaaattttgatgatgacgatcaacagagctga
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