Pecten maximus (king scallop): 117325770
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Entry
117325770 CDS
T07399
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117325770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmax03021
]
117325770
03036 Chromosome and associated proteins [BR:
pmax03036
]
117325770
Transcription machinery [BR:
pmax03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117325770
Chromosome and associated proteins [BR:
pmax03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
117325770
Chromatin remodeling factors
BAF complex
117325770
PBAF complex
117325770
GBAF(ncBAF) complex
117325770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
BRK
Bromodomain
HSA
ResIII
QLQ
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
117325770
NCBI-ProteinID:
XP_033738111
LinkDB
All DBs
Position
4:complement(29793618..29814426)
Genome browser
AA seq
1711 aa
AA seq
DB search
MAAGEDKMMPGPPQPVPGYPQQNQAQDNMQMIQKAMNQMEEKGLQEDPRYAQLMAMADRA
RSGMHPPGMPSGMSQGMPGGPQHHGMQGPRSQNQGQRMATSPSPGMGGHQGMPGSSHNMP
AGPQGMSGTPGMMPGGPQGMHSGQQGMPGPGGQSMGGAQPHRMANMGPNQGMPNGSMGMS
GSSMPNPALGGPNMTAPPSGPPSMNLPQNMPNSSSSAGPNVSQPAGPHISGGPNMGGYNM
ANQGGQGMPSSTGGSPGMTGPGINGPMSGNSTGMGNHGMSGGSSGGPMGHSMPMDDMRSM
SHGNGSSSLGPPNSRMEQDQNQQGQQNMPPNQSGGPSRYNFSTPQLTQLRGQIMAYKLLA
RNQNIPENVRMAIEGKRQFASGSRPMNDSNQQRMPQQPPQPHMPPQNMHYPGGQSMPQGP
PGQPAPPGSQPRPQSQQTPPSSVQSVLSMQQKQSRIAPVAKPQGLDPLEILNERENRISS
RISSRIKELEYLPGIMEEDMKVKAMIEFRALRLLNFQRQLRSEVVAYMRKDTTLETALNT
KAYKRSKRQSLREARVTEKLEKQQKLEHEKRRRQKHQEYLNAVLQHAKDFKEFHRNVTAK
ISKLNKAVMVHHANTEREQKKEQERLEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLHQ
TDEYITNLMSLVSAHKEDIRKKKQARKNKKKKEPGDHPDNADESSNMSEPRISVIETNTG
KVLSGEDAPMSSQLEAWLEMHPGYEVAPREDGEEDDEEEDEEEQEEILLPPPPPPPAANR
PPIQSVDDLAEHEATEIIQTAASRLDDDEYHNQVEMRNYYNVAHTVHESVTEQASIMING
SLKHYQVKGLEWMVSLYNNNLNGILADEMGLGKTIQTIGLITYLMETKRINGPFLIIVPL
STLSNWLLEIEKWAPSVVTISYKGSPITRRSLAPQLKMGKFNVLLTTYEYIIKDKSVLAK
LRWKYMIIDEGHRMKNHHCKLTQVLNTHYCAPHRLLLTGTPLQNKLPELWALLNFLLPSI
FKCCTTFEQWFNAPFAMTGEKVELNQEETLLIIRRLHKVLRPFLLRRLKKEVESQLPDKV
EYVIKCEMSALQRVVYRHMQSRGILLTDGSEKDKKGKGGAKTMMNTIMQLRKICNHPFMF
QHLEEAFAEHQGLSTNVVQGPELYRAAGKFELLDRMFPKLKATGHRVLLFCQMTSLMSIM
EDYFVYKGYRYLRLDGTTKADDRGQLLSVFNCADSPYFVFLLSTRAGGLGLNLQAADTVI
IYDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLMTVNSVEERILAAARYKLNVDEKVIQAG
MFDNKSTGTERRQFLTTLLLQENDEAEEEDEVPDDETINQMLARTEEEFDLYQKMDIERR
REEARNPNRKPRLMEQDELPGWIVKDEAEVERLTFEDEEDKIFGRGSRQRKEVDYSDSLT
EKQWLKAIEDGNLEEVEEQVKRVPTTEKKKSKKRKMVVVDDEDDKKPKKKRGRPPVEKLP
PNPPKLTKMMKKLLDVIIHYKDNDGRVLSDAFFQLPSKKELPEYYEIIIKPVDFKKIKAR
IRDHKYRSIDDLESDVLTLCENAQSYNIEGSLIYEDSIVLQSVFTNARERLEKDGFNVSS
DDSASSEGEEEDDNGDEEDEEVVKVQKVKLKESSKKSGSARKQRKSRGKSRAVISDDEED
GDEEDQSEEETAPSSRSSSRVSSPAPGRRQR
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaggggaagacaagatgatgcctggccccccacagcctgttccaggataccca
cagcagaaccaggctcaagataacatgcaaatgattcagaaggcaatgaatcagatggaa
gaaaagggtttgcaagaagatccgagatatgcacagctgatggcaatggctgacagagct
agatctgggatgcaccctccaggaatgccaagtggtatgtcccaaggaatgccaggtgga
ccacagcaccatggcatgcagggtcctcgatcacaaaaccagggtcagaggatggctact
tctccttcaccaggcatgggaggtcatcaaggaatgcctggctcctctcacaacatgcct
gcaggaccacaggggatgtctggtaccccaggtatgatgcctggtggaccacaaggcatg
cattcaggtcagcaaggtatgccaggcccagggggtcagagcatgggtggcgcccagcct
cacagaatggcaaacatgggaccaaaccagggtatgcccaatggatctatggggatgtct
ggttctagtatgcctaacccagcactgggagggccaaatatgacagcacctcctagtggt
ccaccaagcatgaatttacctcaaaacatgccaaatagctccagcagtgcagggccgaat
gttagccagccagcaggtccccacatatctggtgggccaaatatgggtggatacaacatg
gcaaaccagggaggacaaggcatgccaagtagcactggaggctccccaggtatgactggc
ccaggtataaatggacctatgtctggaaacagtactggaatgggaaaccatggcatgtct
ggaggtagttctggagggcctatgggccattctatgccaatggatgacatgaggtcaatg
agtcatggtaatggcagttcttcactggggcctcctaattccaggatggagcaagaccaa
aatcagcaaggccagcagaacatgccacctaaccaaagtggtggtccatcaagatacaac
ttttccaccccccagctaacccaactccggggacagatcatggcctacaaattacttgca
agaaaccaaaacattccagaaaatgtacgcatggcaattgaagggaagcgccaattcgcg
agtggatcaagaccaatgaatgattctaaccaacagcgaatgcctcaacaaccaccacaa
cctcacatgcctccccagaatatgcactatcctggtggacaaagtatgccgcaaggacca
cctggtcagcctgccccaccagggtcacagccccgtccccaatcccaacagacaccgccg
tcttctgtccagtctgtgctttccatgcaacagaagcagagccggattgcacctgttgcc
aaaccgcagggactggatcctttggagatcctcaatgaaagagaaaacagaatctcatcc
agaatatcatcaaggataaaagaacttgaatatctaccaggaataatggaggaagacatg
aaagtcaaagccatgatcgagtttagagctctgcgattactcaatttccaaagacagttg
aggtcagaggttgtagcgtatatgagaaaagatacaacattagagactgcattaaacacc
aaagcctataagaggagtaagaggcagtcactgagggaggcacgtgtcacagaaaaacta
gagaaacaacagaaacttgaacatgaaaaacgacgcagacaaaaacatcaggaatatctt
aacgctgttctgcaacatgcaaaggactttaaagaattccatcgcaatgttactgcaaag
atcagcaaacttaacaaagcagtgatggtgcatcatgccaatacagaaagagaacaaaag
aaggaacaggaacgacttgagaaagaacgtatgaggaggctgatggctgaagatgaagaa
ggttacagaaaactcattgatcaaaagaaagacaagcgtctagcctacctccttcaccag
actgatgaatacatcacaaaccttatgtctctggtatcagcacataaagaagatataagg
aagaagaaacaagcaaggaagaacaaaaagaagaaggaacctggtgaccatcctgataat
gctgatgagagctccaacatgagtgaaccaaggatatctgtgatagaaaccaacaccggt
aaagttctgagtggggaggatgctccaatgtccagtcagcttgaagcttggttagaaatg
catcctgggtatgaagtagccccaagagaagatggtgaagaagacgatgaagaggaggat
gaggaagagcaagaagagatattattaccgccgccgccacctcctccagccgccaacaga
cctccgatacagtccgtggatgacttagctgaacatgaagcaacagaaattattcaaacg
gcagcatcacgtctggatgatgatgaataccataaccaggtggagatgaggaattactat
aatgtagctcacactgttcacgagtctgtaacggaacaggccagcatcatgatcaatggc
tcactgaaacattaccaggtcaaaggattggagtggatggtgtctttatataacaacaac
ttaaatggtattttggccgacgagatgggtctggggaagactattcaaaccattggtttg
atcacctacctgatggagaccaagaggatcaatgggccattcctgattattgtacctctc
tcaacattgtccaactggcttctggagatagaaaagtgggctccttctgtcgttaccata
tcatacaagggctctcctatcactcgacgttccctagctccacaactcaagatgggcaag
ttcaacgtgctgttaaccacatatgagtacatcatcaaagacaagtctgtgttggcaaag
ttgcgttggaagtacatgatcattgatgaaggacatcgtatgaagaatcaccattgtaaa
ctgacccaggttctaaacactcactactgtgctccccaccgtctgttattgacaggaaca
cctcttcagaacaaattgccagaattgtgggccctgctaaacttcctgttgccaagtatc
ttcaagtgctgtactacatttgagcaatggttcaatgcaccttttgcaatgactggtgaa
aaggttgagttaaaccaagaagaaactctactgattatccgacgtttacacaaagtgttg
cgtccattcttgctacgacgtctgaaaaaagaggtggaatctcagttgcctgacaaggtg
gagtatgtgatcaaatgtgaaatgtcagctctccagcgtgttgtatacagacacatgcag
tcgagaggcattttgttgactgatgggtcagaaaaggacaaaaagggcaaaggaggtgct
aagacaatgatgaataccatcatgcagctgaggaagatctgtaatcatccattcatgttc
caacatttagaagaggcatttgcagaacatcaaggcttgtcaactaacgttgtacaaggg
ccggagttgtacagagctgcagggaagtttgagctgctggacaggatgttcccaaaactg
aaggcaacaggccacagagtactgctcttctgtcagatgacctcacttatgagtatcatg
gaagattactttgtctacaaagggtaccgatacttgcgtctagatggtacaaccaaggca
gatgaccgaggccagcttctgagtgttttcaactgtgccgactctccttactttgtattc
ttactgagtacaagggctggaggattgggcctgaacctccaggctgctgatactgttatc
atatatgactctgactggaatcctcatcaggatttgcaagctcaagacagagctcacaga
attggccagcagaatgaggtgcgtgtgctacgtctgatgacagtaaacagtgtggaggag
aggatattggcagctgcccgatacaaattaaacgtggatgagaaggttatccaggctggt
atgtttgacaacaagtcaacaggaacggagagacgccagttcttaaccacattgttgtta
caggagaatgatgaagctgaggaggaagatgaggtacctgatgatgaaactatcaatcag
atgttggcaagaactgaggaagaattcgacctgtatcagaaaatggatatagagagaaga
cgagaagaagctagaaatccgaacagaaaaccaaggctcatggaacaggatgaactgcca
ggctggatagtcaaagatgaagctgaggttgagagactgacatttgaagatgaagaagac
aagatatttgggcgaggatcaagacaaagaaaggaggtggattactcagactctcttact
gagaagcagtggctcaaggccatagaagatggtaacttagaggaggttgaagagcaggtg
aagagagttccaaccacagaaaagaagaaatcaaaaaaacggaagatggtagtggtggac
gatgaggatgacaagaaaccaaagaaaaagagaggacggccaccagtagaaaagctacca
cctaatccacccaaactcacaaagatgatgaagaaacttctcgatgtcatcattcattac
aaagacaatgatggaagagtcttgagtgatgccttctttcaactgccatccaaaaaagaa
ttgccagaatactatgagatcataatcaaaccagttgactttaaaaagataaaagctcgt
atcagggaccacaaatacaggagtatagatgacctcgagtcggatgtccttaccttgtgt
gagaatgcacaatcttacaacattgagggatctctaatctatgaggattccattgtacta
caatctgtgtttaccaatgcgagagaaagactagagaaagatggatttaatgtgtcatct
gatgatagtgccagcagtgagggagaagaggaggatgataatggtgatgaggaagatgaa
gaggttgtaaaagtccagaaagtgaaattaaaagaatcttcaaagaagtctggtagtgct
aggaaacaacgcaaatctagagggaagtcccgggcggtgatcagtgatgacgaggaagat
ggagatgaagaggaccagtcggaggaagagactgctccaagttcacgcagttcttcaaga
gtgtcctcccctgctccaggacgcagacaacgctag
DBGET
integrated database retrieval system
