Pecten maximus (king scallop): 117325957
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Entry
117325957 CDS
T07399
Name
(RefSeq) general transcription factor IIF subunit 1-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117325957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmax03021
]
117325957
Transcription machinery [BR:
pmax03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
117325957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
117325957
NCBI-ProteinID:
XP_033738380
LinkDB
All DBs
Position
4:complement(35632936..35660422)
Genome browser
AA seq
533 aa
AA seq
DB search
MRWYTGSCVSSGSKTFLKEEGMYQNWTGMNAGDQPGGSTGSTQEYVVRVPKDRQKKYRMM
KFSSGTNIDFAKIHQEQTPVRMERENNLKEYKTAHGIDMMPKFGAGSEFGREQKETARRK
KYGIMMKRYDPGNQPWLMKVGKAKEAKKFKGVKEGTIAENTSYYIFTQCPDGAFEAFPIE
EWYNFSPMVQYKYLNSEEAEEEFNRRDKTLNYFSIMVRKRIKNEEDGDVKLDEGEKTKEK
SKKKSKQGFQLTDFDDDDDEDDDDYDDDDDEKKGDDEKPKKKTKKGAKPKKTAKHNSDDE
AVEESDEGDFDDRELDYITDSDSSLSETGDREKGDLYQEKGVDEERGLKKLLDSDESSED
EEEKKKQEEKEREEAEKKEKKKKDGSDSDSSSSSSGSDSDIDKDEKISAIFMQKKEKRVS
PVPRAGTPVDSEDKTSLKRKLETDTQASKKMRTDSPSLGAQGSSSGGITEESIRRYLMRK
PMTTKELLHKFKSKRVNMTNEAMMSAIATLLKKISPKKEMVKNVMYLSLKKDG
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaggtggtatacagggtcttgtgtgtcttcagggtcaaagactttcttgaaggaggaa
ggaatgtatcagaactggactggaatgaatgctggtgatcagcctggtggctccactggt
agcacacaggagtatgtggtgcgtgtcccaaaagatcgacagaagaagtacagaatgatg
aaattttcatctgggacaaatatagactttgccaagattcaccaggagcaaacaccagtg
aggatggaaagggaaaacaacctaaaggaatacaagactgcccacggcatcgacatgatg
cctaaatttggagcaggaagtgaatttggtcgtgaacagaaagagactgcaagacgcaaa
aaatatggtatcatgatgaagagatatgatccaggcaatcagccctggttaatgaaagtt
ggaaaagcaaaggaggcaaaaaaattcaaaggtgttaaagaagggacaatagcagagaac
acatcctactacatatttacacagtgtccagatggagcctttgaagcgttccctatagag
gagtggtacaatttctcaccaatggtccaatacaaatacctcaactcagaggaggctgaa
gaggagttcaataggagggacaaaactttgaattatttttctataatggtacggaaaaga
attaaaaatgaagaagatggagatgtcaagttagatgaaggagaaaaaacaaaagagaag
tcaaagaaaaagagcaagcaaggttttcaattgacagattttgatgatgatgatgacgaa
gacgatgatgactatgatgatgatgatgatgaaaagaaaggtgatgatgaaaaacctaaa
aagaaaacaaagaagggtgcgaaaccgaaaaagacggctaaacataactcagatgatgag
gcagtagaggagagcgatgaaggagattttgatgatcgagaacttgattatatcacagac
tcagacagtagtctgtctgagacaggagatcgcgagaaaggagacctctaccaggaaaag
ggagtggatgaggaaaggggtttgaaaaaactcttagactcagatgagagcagcgaggat
gaagaggaaaagaaaaaacaagaagaaaaagagagggaagaagcagaaaagaaggaaaag
aaaaagaaagatggatcagatagcgacagtagcagctccagctccggcagtgattctgat
attgacaaggatgagaagatatctgcaatatttatgcagaaaaaagagaagcgtgtttca
ccggttccccgtgctggtacacctgtagacagtgaggataaaacatctctgaagagaaag
ctggagacagatacacaagcttcaaagaagatgaggacagatagtccaagtttaggtgcc
caaggttcatcaagtggtggtatcacagaggaatcaatccggagatatctgatgagaaaa
ccaatgaccactaaggaactgctacacaagtttaaatccaaacgtgttaacatgacaaat
gaggctatgatgagtgctatagcaaccctccttaaaaaaatcagcccaaagaaagagatg
gtgaaaaatgtaatgtacttatctctgaagaaagatggatga
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