Pecten maximus (king scallop): 117326110
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Entry
117326110 CDS
T07399
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03018
RNA degradation
pmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117326110
09123 Folding, sorting and degradation
03018 RNA degradation
117326110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117326110
03041 Spliceosome [BR:
pmax03041
]
117326110
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117326110
mRNA degradation factors
5'-3' decay
Lsm complex
117326110
Spliceosome [BR:
pmax03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117326110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
117326110
NCBI-ProteinID:
XP_033738621
LinkDB
All DBs
Position
4:41367121..41389319
Genome browser
AA seq
132 aa
AA seq
DB search
MLPLSLLRTAVNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEEVIQKSKGRGEMRGRGGPQRGRGGRGAFGSRGGGRGGGR
GGQQRPGKGRGD
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgttacctctatcacttctgagaacagctgtaaaccaccctatgctggtggagttgaaa
aatggagagacgtacaacggtcatttggtcagttgcgataactggatgaatatcaatcta
cgagaagtcatctgcacatcaagggatggtgaccgtttctggagaatgccggagtgttat
atccgaggaagcaccatcaaatacctacgtatccccgacgaggtcatcgatatggtgaag
gaagaggtcattcagaaatccaaaggtcgcggagagatgagaggcaggggtggcccacag
agaggccggggtggtcgaggtgcattcggcagccgtggaggaggaagaggagggggccgt
ggtggccagcagagacctggaaaggggaggggtgattga
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