Pecten maximus (king scallop): 117326278
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Entry
117326278 CDS
T07399
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117326278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117326278
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117326278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117326278
NCBI-ProteinID:
XP_033738844
LinkDB
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Position
4:complement(47243705..47288160)
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AA seq
725 aa
AA seq
DB search
MARHRNVRTMNYEDECYDDDDYLGHSVEDNYCISPGTAAQFTFNREKDFDLSTYMGNEKI
PEEEEGFDSDTDPQSLNDSQGYKKPDLSDTEQGKLNSCLEEIRNILGDSTPDHVLCQIII
KNKYDLQASLNELLKSEEVPKPQRQPRQSRRNRSQGFAPNPPTVELKVPVKKQVSPVKPE
EDTVKAVSQIKINNSKEPLRGFEPSVPGATPSKGNGDVKSNDQRDVSDGTTLNKVVDSVG
SNSDRTPVQTPKKEASTPQVTKSSSKTKQDKARLKEEYDRRQGDKELLNMVVIGHVDAGK
STLMGHLLFQLGMVNKKSMHKYEQESKKVGKGSFAFAWVLDETEEERSRGVTMDIAQTKF
ETPKKAVTLLDAPGHKDFIPNMITGTAQADVGILVVNAARGEFETGFETGGQTREHALLA
RSLGVSQLIVAVNKMDTVKWSQDRYDEVTKKLGAFLKTAGYRDTDISFIPCSGLSGENLA
KAVSEPQLSAWYRGCTLVEQIDKFKTVTRQLDKPLRLTVGDVFKGMGAGFSVTGRVGAGS
VQTGDKVQVMPYGEMATIKGILLGDLSAMCAFAGDHVTLTLTGIDMTNVNLGSVVCDPAN
PIHCATRIRARVVLFNLEIPITKGFMVVFHYQSITEPAVIKRLVSQLNKSSGEVLKNRPK
CLTKNTSAVIEIEFERPVCLELYKDFKDLGRFMLRYSGSTIAAGLVEEILKSKTKADDTQ
GASAY
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcataggaatgtccggactatgaactacgaagatgagtgctatgatgatgat
gattatcttgggcattcagtggaagacaattactgtatttctcctgggactgctgcccaa
tttacttttaatcgtgagaaggactttgatttgtctacctatatgggcaatgaaaagatc
ccagaagaagaggaaggctttgatagtgacaccgaccctcaatccctcaatgactcccag
ggatacaaaaaacctgatctcagtgatacggaacaaggaaagctgaactcttgtttagaa
gaaatacgcaatattctaggagatagcaccccagatcatgtgctttgccagataatcata
aaaaacaaatatgatttacaggccagtctcaacgagttacttaaatcagaagaagttcct
aaacctcagagacaaccaagacaaagtcgacgaaacagatcacaaggttttgcacccaat
cctccaactgtagagctaaaggtgccagtgaagaagcaggtgtcgccagtaaaacctgag
gaggatacggtgaaggccgtgtcccaaataaaaataaacaatagtaaagagccattgcgt
ggctttgagcccagcgtgcctggggccacgccctctaagggcaatggggatgttaagtcg
aatgatcagagggatgtttctgatgggaccacactaaataaagtagtggattccgtcggg
agtaattcggatcgtacacctgttcaaactccaaagaaagaggcgtcaactccgcaggtg
acgaagagttcatcaaagacaaaacaagataaagcaagattaaaagaagaatacgacaga
agacagggtgacaaagagcttctcaacatggttgtcataggtcatgtagatgctgggaag
agcaccctgatgggccacttgttgttccagctaggtatggtcaacaagaagtccatgcat
aaatatgaacaagagtccaagaaggttgggaagggctccttcgccttcgcctgggtactc
gacgagacggaggaggagagatctcgtggcgttaccatggatattgctcagacaaaattt
gaaactccaaagaaagcagtgacactgttagatgctcctggacacaaagactttattcct
aatatgatcacaggtactgctcaggcagatgttggtatcctggttgtgaacgctgcacga
ggagagttcgagacaggctttgagactggaggtcagacgagggaacatgctcttctagcc
agatcattgggtgtgtctcagttgattgtggcggtgaataagatggacacggtcaaatgg
tcacaggacaggtatgatgaagtcactaagaaactaggagctttcctgaagacagccgga
tatagggacacggacatttccttcattccctgtagtggactgagtggagagaacctagcg
aaggccgtatccgagccccagctgtctgcctggtacagaggctgcacactagttgaacag
atagataaatttaaaacagtgacccgccagctagacaagcccttgcgactgacagtaggg
gatgtgttcaaaggaatgggggcggggttcagtgtgactggcagggtgggggcggggtct
gtacaaactggtgacaaggtccaagtcatgccgtatggagaaatggccaccatcaaaggg
atcttgttaggggacctgtcagccatgtgtgcatttgctggggaccatgtgaccttgacc
ttgacaggcatcgacatgacaaatgtcaatcttgggagtgtagtctgtgatccagccaat
cctattcactgtgccacgaggatccgagcgagggtggtgctgtttaatctagaaatccca
attactaagggtttcatggttgtattccactaccagtcaatcactgagccagcagtcatc
aaaagacttgtcagtcaacttaataaaagctcaggagaggtgctgaagaacagacctaaa
tgtttgacaaagaataccagtgctgtgatagagattgagtttgagagaccagtctgcctc
gagctatataaggattttaaagacctcggaagattcatgttgcgatacagtggttctacg
atagctgcaggcttggtagaggagatcctgaagagcaaaacgaaagcagatgacacacaa
ggggcttcagcttactga
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