Pecten maximus (king scallop): 117326535
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Entry
117326535 CDS
T07399
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117326535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmax03041
]
117326535
03009 Ribosome biogenesis [BR:
pmax03009
]
117326535
Enzymes [BR:
pmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117326535
Spliceosome [BR:
pmax03041
]
Complex A
U1 snRNP components
U1 related factors
117326535
Complex B
117326535
Ribosome biogenesis [BR:
pmax03009
]
Eukaryotic type
Pre-60S particles
Helicases
117326535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
CBM53
Gag_p24
Motif
Other DBs
NCBI-GeneID:
117326535
NCBI-ProteinID:
XP_033739185
LinkDB
All DBs
Position
1:17263683..17279853
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AA seq
591 aa
AA seq
DB search
MAARVINALMRVRSPFKPLRSFHSSTCLLSSEADVKRVEDEDDIRLEDVTHDTTKRQHYK
ADIINDEPLTRSINWNEDRKPRAGFNRWTDDKEVYSQYTKHKFVGQNPGFKPKVSDDFGF
DSSVPVDTPAYDPNLKKDVYDEDAKTADRTEEDIQNFYTENKITVIGSNDLKPILSFDEL
TNMDKFQRRSKESGWTEPFPIQSVTWPIAMSGKDMVGIAQTGSGKTLGFVLPAILHIMKK
RSKLASRSYNIEPTVLVMTPTRELTQQVKKVVSEVGRDYGIHCGCAFGGSGMKNQLSELR
GADICIATPGRLNDYLSRGVVSLKKCSYVVLDEADRMLDMGFEVQIRQILRYVKPNRQML
MWSATWPREIQHLAAAYLSKPVQIRIGSMDLMTNPNISESFILATEKDKFSKLCTLLGDI
ATSYPDECKTLVFTQRKKTADELSESLMRQGIPSFALHGDKNQAQRDQIMDLFRRRKKIL
LIATDIASRGIDVADISNVVNYDMPSDAESYVHRIGRTARGGRKGKAFSLVTTEDFSVLK
ALVAMFKQHKKKVPPQLYELIKADRGYNFGGGKRRYRSLAGPTKVNPLWEE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacgtgtgatcaatgcccttatgagagtaagatcgccgtttaagccgctgaga
agtttccacagtagtacctgtttgttgagtagtgaagctgatgtaaaaagggttgaagat
gaagacgatataagattggaggatgttacgcatgatacaacaaaaagacaacactacaaa
gcagatatcataaatgatgaaccattaactagatctataaactggaatgaggatcgtaaa
cccagagctggattcaatagatggactgatgataaagaggtgtacagtcaatacactaaa
cataaatttgtgggtcaaaacccaggtttcaaaccaaaagttagtgatgattttggcttt
gacagtagtgtacctgttgatactccagcctatgatccaaatctcaaaaaagatgtgtac
gatgaagatgcaaagactgctgatcgaacagaagaagatatacagaatttttatacagaa
aacaagatcacagtgattggttcgaatgacctcaagcctattttgtcttttgatgaatta
acaaacatggataaatttcaaagacgaagcaaagaaagcggatggacagaaccttttcct
atccagtcagtgacttggcctattgccatgtcgggcaaagacatggtaggaatagcccag
acaggctctggaaagaccctaggatttgttttgcctgccattttacatataatgaagaag
agaagtaagctggcttcacggtcctataacattgaaccaactgttcttgtgatgacacca
actagagagctaacacaacaagttaagaaagttgtgagtgaagttgggagggactatggt
atccactgtggctgtgcttttggaggaagtggtatgaaaaatcaactttcagaattaaga
ggtgcagatatttgtattgcaacaccgggtagattgaatgattacctgtccagaggagta
gtcagccttaaaaagtgttcttatgtggtgcttgatgaagctgacagaatgctggatatg
ggatttgaggttcagatcagacaaattctcagatatgtaaagcctaaccgacaaatgctc
atgtggagtgccacatggccgagagaaatacaacatttagctgcagcttaccttagcaaa
ccagtacagattcgcattggaagtatggatctgatgaccaacccaaacatatcagaatca
tttatattggctacagaaaaggacaaattctcaaaactctgtactttgctgggggatatt
gctaccagttatccagatgaatgtaaaacacttgtgttcacacaacgaaaaaagacagca
gatgaactctctgagagcctaatgaggcaaggaattccttcatttgctttgcatggggat
aaaaatcaggcacaacgggatcaaattatggatttattcagacgaaggaagaaaatactg
ctgattgctaccgatattgcatctagaggaatagatgttgcagatatttcaaatgtcgtc
aattatgacatgccttctgacgcagaatcctacgttcaccgaatagggaggactgcaaga
gggggcaggaaaggaaaagctttctctttagtaacaacagaagattttagcgttctgaaa
gcactggtagctatgttcaagcaacacaaaaagaaagttccacctcagctgtatgaattg
ataaaagcagatcgaggatataactttggtggtggaaaaagaagataccgctcattagct
ggaccaactaaagttaatccactgtgggaagaatag
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