Pecten maximus (king scallop): 117326831
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Entry
117326831 CDS
T07399
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117326831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmax03041
]
117326831
03009 Ribosome biogenesis [BR:
pmax03009
]
117326831
Enzymes [BR:
pmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117326831
Spliceosome [BR:
pmax03041
]
Complex A
U1 snRNP components
U1 related factors
117326831
Complex B
117326831
Ribosome biogenesis [BR:
pmax03009
]
Eukaryotic type
Pre-60S particles
Helicases
117326831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
Tuberin
Motif
Other DBs
NCBI-GeneID:
117326831
NCBI-ProteinID:
XP_033739489
LinkDB
All DBs
Position
1:complement(18081116..18090724)
Genome browser
AA seq
704 aa
AA seq
DB search
MSYRDRMFDSSSRSDRKGFGGNSGKLPGGFPSRFGQGGGGGSRFGGGGRGGGGGFGGGMR
GKLDKNSQPGQNLRKPRWETERLIPFEKNFYREHPKAASRDPNEIAAFFEANKITFKGSN
PPKPVLTFEEAAFPEYVMASFRRQSWGNPTAIQAAGWPIALSGRDFVGIAQTGSGKTAGF
ICPATVHIMAQPHLQPRDGPIVLVLVPTRELAQQVQEVAIEFGQSSRIRSVCVYGGSPKG
PQIRDLERGAEICIATPGRLIDLLEAGKTTLKRTTYLVLDEADRMLDMGFEPQIRKILEQ
IRPDRQTLMWSATWPKEVRKLAEDFLKEYVQLNIGALQLSANHNILQIIDVCNDSEKDYK
LLKLLEEIMQEKENKTLVFTETKRRADELSRKMRREGWPVMCIHGDKSQPERDWVLSEFR
NGRTPILIATDVASRGLDVEDIKFVINFDYPSSSEDYVHRIGRTARAGNTGTAYTFFTPD
NVKQANDLVNVLREANQVINPKLLQLAENSRFGYKGRSRARGRDDRGSRFGNRDSFGSRD
RGSSRGGRGGYGGNRGGYGDGGGSNFNRDRPGGNSVGGGSRFSNQGASRFGGASNSNSTN
NSYGNNANKSYGQGNANNYGSQNTMNGGNFGGQQQHHQQQQNGYASNNGVNNSAGKPKDL
QNMAYMYSQWMQQSQKPNQPPLPNGNPPPPPAPPKFPPPPPPSM
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacagagacagaatgttcgattcctctagtcgatcggatagaaaaggatttggt
ggaaattcaggaaaattgcctggtggatttccatcacgttttggacagggaggtggagga
ggcagccgctttggaggtgggggcagaggaggtggtggtggttttggtggtggaatgcgt
ggaaaactagacaagaacagccagccaggtcaaaacctcagaaagccaaggtgggagact
gaaagattgataccatttgagaagaatttctatcgagaacacccaaaagctgccagcaga
gatcctaatgagattgctgcatttttcgaagctaacaagataaccttcaaaggaagtaat
cctccaaaacctgttttgacctttgaagaagcagcatttccagaatatgtaatggcttca
ttcagacgacagagttggggtaatccaacagccattcaagcagctggttggcccatcgct
ttgtctggcagggactttgtaggaattgcacaaactgggtcgggtaaaactgccggtttc
atctgcccagctactgttcacatcatggcccagcctcacctgcaaccacgtgatggacca
attgtgttggttttggttcctactcgagaattggctcagcaggtacaggaagttgccatc
gagtttggtcaaagttcaaggataagaagtgtgtgtgtttatggtggatctcccaaaggc
ccacaaataagggacttagagagaggagcggaaatctgcattgctactccaggaaggctc
atagatctgcttgaagctggaaagactacattaaaaagaaccacatacttagtccttgat
gaagcagacagaatgttggacatgggatttgagcctcagatccgtaaaattttggagcag
attcgtcctgatcgtcagacactcatgtggagtgcaacttggcccaaagaagtgagaaaa
ctggctgaagattttctgaaggagtatgtacaactcaacattggagccttacagttgagt
gccaaccacaatatccttcagataatagatgtctgcaatgactcggaaaaggattacaag
ctgttaaaattgctcgaggagataatgcaggagaaagaaaacaaaacattggtgttcaca
gagaccaagaggagagctgatgaattgtcacgcaaaatgaggagagaagggtggccagtt
atgtgtattcatggggacaagtcccagccagagagagactgggtactcagtgagttcagg
aacggacggacacctattcttatcgccacagatgtagcttcccggggtctagatgtggaa
gacattaagtttgtcataaactttgactacccctcaagctctgaggactatgtacataga
attgggcgtactgccagggcaggcaacacaggaactgcttacacattcttcaccccagac
aatgtcaaacaagctaatgacctagtcaatgtcctgcgagaggccaaccaagtcatcaat
cctaaactccttcagttggcagagaattccagatttggatacaaaggtcgcagcagggca
cgaggacgtgatgatagaggcagtcggttcggaaatcgcgattcatttggctcgagagat
agaggatcatcccgtggggggcgcggtggatatggaggaaaccgaggtggatatggtgat
ggtggtggctccaacttcaacagagataggcctggaggaaattctgtaggtggaggtagc
aggttctccaatcagggggcttcaaggtttgggggggccagtaatagcaacagtacgaac
aactcatatggcaacaatgccaataaaagctatggacaagggaatgccaacaactatggc
agtcaaaatactatgaatggaggaaactttggaggacagcagcaacatcatcaacaacaa
cagaatggctatgctagtaataatggagttaacaacagtgctggcaaaccaaaggacttg
caaaatatggcttacatgtacagccaatggatgcagcaatctcaaaaacctaaccaacct
cctctccccaatggcaatccaccaccaccacctgcaccacctaagttccctcccccacca
cccccatctatgtga
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