Pecten maximus (king scallop): 117326849
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Entry
117326849 CDS
T07399
Name
(RefSeq) exosome complex component RRP46-like
KO
K12590
exosome complex component RRP46
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117326849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117326849
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117326849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117326849
NCBI-ProteinID:
XP_033739523
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All DBs
Position
1:18090895..18096443
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AA seq
220 aa
AA seq
DB search
MEVTTRSSGLHLRNMVCELGQLSRPDGDVTMFQGDTSVTTAVYGPGEVRMNKEILNKATV
ETVYKPKSGLPGCAEKMFERTLRNTCETFLLAALHPRSSISIIVQEIQDSGSLLSCCVNS
CCLALLDASVAMKFLVAAVTCAIDGDDCVILDPTAKQERESSAILTFVFENKDNSILTVY
TTGSYTVQQFQKSSQTCREASRAVFDFYKTSIEKKLSKAA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggaggttaccacgagaagcagtggtcttcacttgcgcaacatggtgtgtgaattgggt
cagctgtcgcgccctgatggtgatgttaccatgtttcagggagatacatcagtcacaacg
gctgtgtatggaccgggagaagtgcgtatgaataaagaaattcttaataaggccacagta
gaaactgtatataaacccaaatcaggactgcctggctgtgctgaaaagatgtttgaaaga
actctaagaaacacatgcgagactttccttttagcagcattgcaccctagatcttctata
agtatcattgtgcaagagattcaggactctggttcattactatcatgttgtgtgaactct
tgttgtttagcattgttggatgctagtgtggctatgaagttcctagttgcagcagtgaca
tgtgccatagacggagatgattgtgtaatcctagacccaacagctaagcaggagagggag
agctctgctatccttactttcgtatttgagaacaaagacaattccatactgactgtgtac
accacaggaagctacactgtccaacagttccaaaagtcttcacaaacatgtagagaagcc
agcagagcagtgtttgacttttacaaaacttccatagaaaagaaactctcaaaggctgcc
taa
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