Pecten maximus (king scallop): 117327008
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Entry
117327008 CDS
T07399
Name
(RefSeq) LOW QUALITY PROTEIN: tuftelin-interacting protein 11-like
KO
K13103
tuftelin-interacting protein 11
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmax03041
]
117327008
Spliceosome [BR:
pmax03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117327008
Other components
Complex C specific factors
117327008
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
DUF3209
RTP
WHD_F93
Motif
Other DBs
NCBI-GeneID:
117327008
NCBI-ProteinID:
XP_033739708
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Position
5:7346004..7366872
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AA seq
854 aa
AA seq
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MSSPEVERFEVTDDDLLHEFNQRPGHRISKNRAIYGMWAEDSDEDTGPTIGFSRGSRGKK
NYGAPVNFVSGGVKQGSKILKENKGKEMEEEEEDSDSDSAGQSVPLVQAPLRPSQVPIVQ
PPLRSSGASAKSKPTQLGGSKKFAGVNNQDKSFGSWEKHTRGIGQKLLEKMGYRPGEGLG
KTHQGITTPVEAVKRKGRAAVGAYGTERSERSLKDYPVYDSEEEEDNRFQSQLQQWKKTE
GNQKKPKYVYKTAQELIDTGVVKKRPQLSKSSKVKVIDMTGKEQRVLSGYHAIGHRHDKP
EIEEEPAPNLTNQKRAFDLPELTHNLNLLVDMAEEDIMQNDRKLRYLKDHIVNMRYEKER
LDEICNQEEKLMDRLKKVLEIVDMCQKRTQPGCDDPMSLSECAAIFKSLQEDYYEEYRMY
DLSSLAIALVFPMMKQHFTGWDPLKNPTHGLETVREWKALLEDYTTKLAAGPLTGGQDMD
VYQRLLWDVWLPFVRTTVLTWNVRNCDNIIELLETWMPVLPGWVMGNILDQLVLPRLLQE
VENWNPLTDTMPIHAWLHPWLPLMGDKLEPLYAPIRHKLANALINWHPSDSSAKVILQPW
MKVFKPGHTEAFLVKNILPKLAMCMTEFAICPHQQVLDPWHWVVAWRDIIPAKHMVAMLD
KTFFPKWLQVLCGWLGNMPNYEEITKWYLGWKSLFPEQYMSIPVVKDHFNKALDIMNRAV
SGHFQPGAKENMAYFAHTERRHMADTSVPPPPPPPPPPTSVPLRPPAPPIPQDYQAVRSS
TASSSYPASFKELVEKKAEESNILFMPIPGRTQEAKQVYRYGKLIMYMDRSVIFIQENNQ
WIPVSLQTLIDKAV
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaccagaggtggagagatttgaggtcactgacgatgaccttcttcatgaattc
aaccaaagacctggacacaggatttccaaaaatagggccatatatggaatgtgggcggag
gacagtgatgaggatacaggccctaccattggattttctcgagggtctcgtgggaagaaa
aactatggggcgcctgtcaacttcgttagtggtggagtgaagcaaggcagcaagatctta
aaagaaaacaaaggaaaggaaatggaggaagaagaagaggattccgattctgacagtgct
gggcagtctgtacctctcgtccaagcaccgttaaggccctcacaggttccaatagtacaa
ccgcctttgaggtcatctggtgcatcggccaagagcaaaccaacacagctgggaggctca
aaaaagtttgctggtgttaataatcaagacaagtcgtttggcagttgggaaaaacacacc
agagggattggtcaaaaacttctcgaaaagatgggatacagaccaggcgaaggtctgggc
aagactcatcaaggtatcaccactcctgtggaagcagtgaagcggaaaggtcgagcagct
gtcggagcctacggtacggagaggtcggaaaggtcattgaaggactaccctgtctatgac
tcggaggaggaggaagataatagatttcagtcacagctacagcaatggaagaaaacagag
ggcaaccagaagaaaccaaagtatgtctataaaactgctcaggagcttattgacacaggg
gtggtgaagaaacggccacagctgtcaaaatcatccaaggtcaaggtcattgacatgact
ggcaaggaacaaagagttctttcaggttaccacgccataggtcatcgtcatgacaaacct
gaaattgaggaggagcctgcaccaaatctgaccaatcagaagagagcctttgacttacca
gagctgacccataacctgaatctccttgtagatatggccgaagaggatattatgcaaaat
gatcgcaaattgcggtacttgaaggatcatattgtaaacatgaggtacgagaaagaacga
ctagatgaaatctgtaaccaggaggaaaaactgatggacaggctaaagaaagtgctggaa
attgtagatatgtgtcaaaaaaggacacagcctggctgtgatgatcccatgtccttgtcc
gagtgtgcggccatctttaaatcactccaagaagattattatgaagagtatcgaatgtac
gacttgtcatctctagcaatagctcttgtctttcctatgatgaagcagcattttactggc
tgggatcccctgaagaaccccactcatggcctagagacggtgagagagtggaaggcactt
ctagaagactacactaccaaattggcggccggacccctgaccgggggtcaggacatggac
gtgtatcagaggctactctgggatgtatggctgccatttgttaggactacagtgttgacg
tggaatgtacgtaactgtgacaacatcatcgagctcttggagacctggatgcctgtactt
cctggttgggtgatggggaacatcctcgaccagctggtgttaccacggttactacaggaa
gtggaaaactggaatcctttaacggacactatgccaattcatgcatggctgcatccatgg
cttccactcatgggcgacaaactggaaccactctatgctccaatcaggcacaaacttgca
aatgctctcattaactggcacccttcagactcgtcagccaaggtcatactgcagccgtgg
atgaaagtgtttaagccaggacacactgaagcattcctcgtcaaaaatatcctcccaaaa
ctcgccatgtgtatgacagagtttgccatctgtccacaccagcaggtcctggatccatgg
cactgggtagtggcttggcgagatatcattccagctaaacacatggtagccatgctggac
aaaacctttttccccaagtggctgcaggtattgtgtggatggctgggtaacatgccaaac
tatgaggaaatcaccaaatggtaccttggctggaagtcgttgttccctgagcagtacatg
tccatacctgttgtcaaagatcactttaacaaagccctggacattatgaatcgggcagtc
tctggtcacttccagcctggagccaaggaaaacatggcttactttgcccatactgagaga
agacacatggcggacacgtctgttcctccccctcctcctcctcctcctcctcctacatct
gtacccctccgccccccagcaccaccaataccacaagactatcaagcagtccgaagttcc
acagccagttcttcatacccagccagctttaaggagttggtggagaaaaaggctgaagaa
agcaatatccttttcatgcctataccgggtcgtacccaggaggcgaagcaagtgtaccgt
tacggtaaactgattatgtatatggacagaagtgtgatatttatacaagaaaacaaccaa
tggatccctgtatccctacagacacttatagacaaggcggtatag
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