Pecten maximus (king scallop): 117327139
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Entry
117327139 CDS
T07399
Name
(RefSeq) vacuolar protein sorting-associated protein 13C-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmax04131
]
117327139
Membrane trafficking [BR:
pmax04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117327139
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_VAB
VPS13_M
VPS13_C
PDCD2_C
Motif
Other DBs
NCBI-GeneID:
117327139
NCBI-ProteinID:
XP_033739881
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Position
5:complement(10974335..11037374)
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AA seq
2015 aa
AA seq
DB search
MSIDDMRPNNTRAVRNVFYCTREEVVTDDDHKPLPMISVIYKTAHDGSQEADIRMEKVTL
NLNVPFLLRLQEFYAVSMGTTSDLLPPPLPGDLDTDGSHVDSPDLPAPVTPLKVFCTIKE
PEIVLFADPSLEDSRIVVLKADIEVDMVNNEKTQKLVSKVKDLKMYSAQYSTQHAVSSWV
IQPCDLTFERTYNILENHVDMSAHITELILCTSPSVLHFAFDVLALMGGKDSETPEDQAT
TSQTEDYRNLWGVKATSAEKWLNKIDNSGNSSMNPLIPQMSPSESLHLEIEQIHAYFQVR
NLDHQVNLLHIRSSLDCKLHDWNKQFHMNAEMKLQVDYFNEKLSVWEPLVEPVSEKEGIY
RPWEVVIKVIRGRSYPMTFNYVQEGFNMEECLRNDVQQLLHNSRRRSSSSESETDESTEM
TVLRPKLPRKRSRIASDKSYESIKQGSIQGESDTEPDGLIHSITNKLGGIFSDDSSDDAD
VSETEDTDELHDPSLDKPVFLTPKGPVQVSMARRLCNAIKCQCPCLAKCRARSRYYKQVR
QVESGLGFDQVDGRIEEEEEEEVGPQCNYVVIASQDKLQLNVTPQAIHVLTDVSQALTSP
ESLVFDCKDLPAFELHSKIGIHNTVTLHQDIKLYKDNVTGCTVKRAGDEVSDLQIIPRSS
YNGVNAVDSSADGLLTRVLGSAGHVLTSAGAFVFDDDDDYLSGGEMDKDRLRLQVDGFDL
TSTILHRRACLQLIPLTPDKHSIKYWFLLEIDVSHGRKVINILSPLKVKNSLTLDLDILC
KTADLEKYLPERDVLGSKEYTKLATLAPDQDYNVPLFLAYHCDLFVCPTQLSRYQIHNKG
IYWKDLLMTKEKAKCFTCQGSGEDRSFNLKVLCKEQTKLQPSQEIPKGVPYYVLHVKAPV
MIHNYLPYDIQFSLEGTGNFSSLTHGESTPLYTVEQATPQKLHIQLQDYIGCDWTGIFEI
SQGLEEFKAVSMAPYDCAMDENSNKQLTIIVNAKEKLSLDLYFYSPYWVLNKTELPIQIR
GSGSDAVYDCCPSNAVPLLFRFKKTKRKKAKVRVYNSKWSQSFSMDTIGNSGVVICYDKE
RQKRYRMMLQCQWSSLKLTRIVTILPFFLVVNNSSHNLRYMEENEETDLWEDLKKGKCCP
LWPRTTSEKMFIKYEDSAVVSEHIPFNVLNNTVLRMEHGSALCVEVSGGIETPRTITFSD
YDPGDAPVRVENLCDDVFITIHQINQHQMTVLPADRSILYTWDDPTGPRKLMWNVYGCSN
KQDSEVDISKDGFYFKQLKIQLVQESGTYKYSPQQGRHHHDSSPEDDSDAVDYMYDSDID
NSTMLKTNSYKMKIFWISFLDGQQRVVLFTRDSRVADAARMMNEGEQASLLTMFSLDGLS
LSVVSEAYEEVALVSVSSMPAMWQIEVKNKLKVLEDVTLVTWLEDKWIHGLSQASLEDRI
EVDFANMRMTKPYIGDLCRVCPPGMLFQYRRSEHQTFIHAKVHHIQVDNQLHDAYYQTVL
HPAPIPLNMIKKKGPKPFIEFGMIRRCVPENNVDTFRQLQVIIQEFSVQLDWGFIESIQD
TFADLVPKQESECARLQSDLILAQKHLNDLAEVKDRSTKRIFFEMCKISPLKLHVSFSFR
GTPHLTRDIQPNMTSDIKEFLRNSVGATFIEVKDVELKFGYFEKRGASLSWNQLTNQAVA
HYRQQLILQVYVVVLGLDVLGNPYGLMQDISQGLGDLFYEPLLDTIQGDDEFSENMIRGF
QSAMGHIVGGGANSVARITGSFGSALAYLSFDKEFQKKRRRRMQQQPADLPHSMAMAGKG
FLTGIKFGLTGIVLDPYQGASEDGVEGFFKGIGRGILGLITQPIGGVLDMVSLAFDGVRR
AAELEGGVVMRMRLPRCIDHYRGLKPYSDYRARGSHILKGLKGGKYSKTDVFRNFAPLSH
EDKADLVFITNRHILYLEKSRFSGGYDVEWEVELKSILGVPAIIEDEKKLVIHLKDNTGS
LFSDNNVEITSLEIDILKWIQKKLETVLNNQIYKV
NT seq
6048 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattgatgatatgagacctaacaacacccgggcagtgagaaatgtattttactgt
accagagaggaagttgtcacggacgatgaccacaagccactacctatgatatctgtgata
tacaagactgcacatgatggaagtcaggaagcggacatacgtatggaaaaagtcactcta
aacttgaatgttccattcctgctacgtttgcaagaattctatgctgtttccatgggaact
acttcagacttacttcctccgcctttacctggtgaccttgacactgatggaagtcatgtt
gattcccctgacctacccgcccccgtcactcctctcaaggtcttctgtactattaaggag
ccagagatcgttttgtttgccgaccctagtctcgaggacagtcgtatagttgtcctcaag
gctgatattgaagtggacatggtgaacaatgaaaaaacacagaagcttgtatccaaagta
aaagatcttaagatgtattcggcccaatattcaactcaacatgccgtcagcagctgggtg
atacagccttgtgatctgacttttgagaggacgtacaacattttagaaaaccatgttgat
atgtcggctcatattacggagctgatattgtgtacgtctccaagtgtcctccattttgcc
tttgatgtgttggccttgatgggaggcaaagattctgagacaccagaagaccaagccaca
acatcacagacggaggattataggaacctttggggtgttaaggcaacatctgctgagaaa
tggctaaacaagatagacaacagtggtaacagttccatgaacccgttgatacctcagatg
tctccgtcagagagcctccatttggaaatcgaacagatacatgcgtacttccaagtgcgt
aaccttgaccaccaggtgaaccttcttcacataagatcatcgttggactgtaaactccat
gactggaacaaacagttccacatgaatgcagaaatgaagctacaagtggactattttaat
gagaagctcagtgtgtgggaaccgctggtggaaccagtgtccgagaaggaaggcatctac
cgaccttgggaggtggtcatcaaggtgattagagggcggagctaccctatgacctttaac
tacgttcaggagggatttaacatggaggagtgtctccgtaacgacgtacagcagttgctt
cacaacagtcgtcgtcgttcgagcagctctgagtcagaaactgacgagtcgaccgaaatg
actgttctcagaccaaagttgccacgaaagcggtccagaattgctagtgacaagagttat
gaatctataaaacaaggtagtattcagggcgagtctgacacagagcccgacggcctcata
cacagcatcactaataaacttggcggaatcttctccgacgacagtagcgatgacgccgat
gtaagcgagactgaggatacggatgaactccatgacccctcattagataaacctgtcttc
ctgacccccaaaggaccggtccaggtctccatggctcgaagattatgtaatgccatcaaa
tgccagtgtccgtgccttgctaagtgccgagcgaggtctcgatattacaaacaagttcga
caagtggagagtggtctcggatttgaccaggtggatgggaggatagaagaagaggaggaa
gaagaagttggaccacagtgtaactatgtagtgattgcctctcaggataaactacagctg
aatgttacaccacaggccatacacgtactgaccgatgtatcgcaggcactgacctcccca
gaatcactggtctttgactgtaaagacctaccagcatttgaactacacagcaagattggc
atccataacacagtaaccctccatcaggatatcaagctttacaaggacaatgtgactggt
tgcactgttaagcgagcaggggatgaggtatccgatttacagatcattccacggagtagc
tacaatggggtcaatgctgtggacagttcggcagacggcctgctgacacgtgttctagga
tctgccggacacgtgctgacctcagctggtgcttttgtatttgatgacgacgatgactac
ttgtctggaggcgagatggacaaggacagactccgactccaggtggatggttttgacctg
acatcaactatcctacacagaagagcctgtctacagcttatccccctcaccccagacaag
cattccatcaagtactggtttttgttggaaatagatgtttcccatggtcgcaaggtcatc
aacattctttcaccactcaaggtcaagaacagtctgacccttgatctggacatcctgtgt
aagactgctgaccttgagaagtatctaccggaaagggatgtccttggcagtaaggagtac
actaaactggccactctggcgccagaccaggactataatgtacctctgttcctggcctac
cactgcgacctgtttgtgtgtccaacacagctgagtcgataccagatacacaacaagggt
atctactggaaggacctgctgatgacgaaggaaaaggccaagtgttttacctgtcagggt
tccggagaagataggtcattcaacctcaaggtattgtgtaaggagcaaacgaaactgcag
ccgagtcaagagatccctaaaggtgtgccgtactacgtgcttcatgtaaaggctcctgtc
atgatccacaactatcttccttacgacatccaattctcgttagagggtacaggaaatttt
agcagtctgacccatggggagagcacacccctatacacagtggaacaggctactcctcaa
aaactacacatacagttacaagactacattggctgtgattggacagggatatttgagatc
tcgcagggattggaggaattcaaagcggtctccatggcaccttacgattgtgctatggat
gaaaacagtaacaaacaattgactatcatcgtcaatgccaaagaaaaattatcacttgac
ctctatttctacagtccttattgggtccttaacaagactgagctccctattcagatacgg
ggctctgggtctgatgcagtttatgactgttgtccttccaatgctgttcctttgctcttc
cgtttcaagaaaacaaaacgaaaaaaggcgaaggtgcgagtgtacaactcaaaatggtcc
cagtccttctccatggataccatcggtaactctggtgtggtcatctgctatgacaaggaa
cgccagaaaagatacaggatgatgctacaatgtcagtggtcaagcttgaaactgactcgg
attgtaaccatactacctttcttccttgtcgtcaacaattcttcacataatctacgatat
atggaggaaaacgaagaaacggacctgtgggaggaccttaaaaagggcaagtgctgccct
ctgtggccaaggacaacaagtgagaagatgttcataaaatatgaggacagcgcagtcgtc
tctgaacacattccattcaacgttctcaacaatactgtactgcgtatggagcatgggtct
gccctgtgtgtagaggtttctggcggcatcgagactccaagaacgatcacattttctgat
tatgaccccggagacgctccagtgagagtggaaaatctttgtgatgatgttttcattact
atccatcaaataaaccagcaccagatgaccgtactgccagctgaccggtccatactttat
acctgggacgaccccacagggcccagaaaacttatgtggaatgtctacggttgttccaac
aaacaagactctgaagtcgacatttccaaggatggtttctacttcaagcagctgaagatt
caactggttcaggagtcggggacatacaaatacagccctcagcaaggacggcatcatcat
gacagcagcccagaggatgacagtgatgctgtagactatatgtacgatagtgatattgac
aattcaactatgctgaaaacaaactcctacaagatgaagattttctggatttccttcttg
gatggacagcaaagagtggttctgttcacaagagactcacgggtcgcagatgcagcacgt
atgatgaatgaaggagaacaggcctccctgctgacgatgttttctttagatggattatct
ttgtctgtggtgagcgaggcttacgaggaggttgccctggtcagtgtgtccagcatgcca
gccatgtggcagattgaggtcaagaacaaactcaaggtcctagaggatgtcaccttggtg
acctggttagaggataaatggatccacgggctgtcccaggccagtctagaggatcggata
gaggtggactttgccaacatgcggatgaccaagccttacattggagatttgtgccgtgtg
tgtccacctgggatgttgttccagtacaggagatctgagcaccagacattcatacatgcc
aaagtccaccatatacaggttgacaaccagctccacgatgcctactaccaaactgtctta
catccagctcctatacccctaaatatgatcaagaaaaagggaccaaaacctttcatagag
ttcggcatgattcgtcgctgtgttccggaaaataatgttgacaccttcagacaactacag
gtgatcatacaggaattcagtgtccagcttgactggggattcatcgagtccattcaggac
acatttgctgaccttgtgcctaaacaggagtctgagtgtgcaagattgcagtctgacctt
attttagcacagaagcatcttaatgacctcgctgaggtcaaggatagaagcacaaaaagg
atattctttgagatgtgtaaaatttctccactcaagctacatgtgagcttttccttccgc
ggaacaccacacctgactcgagacatccagccaaatatgacttcagacatcaaagagttc
ctccgtaactctgttggagctacttttattgaagttaaggacgtggagctgaagtttgga
tattttgagaaacggggtgcctcgttgtcatggaatcagctgaccaatcaggcggtagcc
cactaccgccaacagctgatcctacaggtgtacgtggtggttctgggtctagatgtactg
ggaaacccctacggtctgatgcaggacatctcacagggtctcggggacctcttctacgaa
cctctgctggacacaattcaaggagatgatgaattctccgagaacatgatcaggggcttt
cagagtgccatggggcacatagtgggtggcggggcgaactctgtagcaaggatcacaggc
tcatttggtagtgccttggcatacctctcatttgacaaggaattccaaaagaaacgtaga
cgacgaatgcaacaacagccagcagacttgcctcatagcatggctatggcgggaaagggt
ttcctgacagggatcaaattcggactgacaggaattgtattggatccctaccaaggtgcc
tcggaagatggagtcgaagggttcttcaaaggcattggacgcggcatcctgggtctaatc
acacagcccatagggggagtattagacatggtcagtctagcgtttgatggtgtacgaagg
gcagccgagctggagggcggcgttgtgatgcgaatgaggctacctagatgtatagaccac
tatagaggcctgaaaccctactccgattaccgggccagagggagccacatactaaaggga
ttaaagggaggcaaatactccaagacggatgtgttcaggaactttgctcctcttagtcat
gaggataaagctgacttagtcttcatcacaaacagacatatcttatacctggagaagagt
agattttctggtggctatgacgttgaatgggaagttgagttaaagagcattcttggtgtt
cccgccattatagaagatgagaagaagcttgtgatacatctaaaggacaatactggttct
ctgttcagtgacaataatgttgagataaccagtctagaaattgacattctaaagtggatc
cagaagaaattagagactgttcttaataaccaaatttacaaggtctga
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integrated database retrieval system
