Pecten maximus (king scallop): 117327185
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Entry
117327185 CDS
T07399
Name
(RefSeq) PH-interacting protein-like
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmax04121
]
117327185
Ubiquitin system [BR:
pmax04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117327185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Bromodomain
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SPT8
NBCH_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_IP5PC_F
Auxin_resp
DUF3104
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
117327185
NCBI-ProteinID:
XP_033739931
LinkDB
All DBs
Position
5:complement(12493467..12529596)
Genome browser
AA seq
1780 aa
AA seq
DB search
MPSEGSSDVSLSAVQSELYFLISRFLASGPCQRASEALRQELKEHQLLPKRVDWEGRQHE
RSYENLVNLNRHISSSHLLQICQRLGPLLDKEINSSATGLQSLLGAGKQSLLRTKESVHH
PRWRPERHLATHHHRSLLPPVNLVVPSLGHVTKAREITGQSRMDLICPIFIFTKVSMHAR
KLGHLSAVYCVAFDRTGQYIFTGADDALIKIWFAASGRLIDTLRGHNSEITDIAVNFENT
LLASGSCDKIIRVWCLRTKAPVAVLQAHTGMITSLQFCPQARGEYRILSSTGGDGCVCFW
TWNVTTNKFNPKPAKFIERSRAGAQMLCSSFSPGGVFLATGSADHVIRVYFLHVTTPEKI
CELEAHTDRVDSICYSNSGEKFVSGSRDGTARIWRYERQEWKSIVLSMSTKLPSCPKSET
EDKGQKPRVTMVAWNLDDNLVVTAVNDCSLKVWDSHHGKLLHVLKAHEDEVFVLEHSPTD
PRIFLSAGHDGYVIIWDLNTGNKIKSYFNMIEGQGHGAVFDCKFCPDGNSFVATDSHGHL
LLFGFGSNEKYKEIPQELFFHTDYRPLMRDSNNYVLDEQTQQPPHLMPPPFLVDIDGNPY
PPKFQRLVPGREHCKDNLLVPQMAVNETGDQEVVGERVTEDNDEQLMPPPVAPNNLDSLI
EQLQREQDNRLAARGSQRVARSNSASGGNHAHRVGMRMSGETEGVRQSLGNINQQATQSD
LAAWSRRIIVKELHPSVLSSCEEMRMAHAEIEAKRFLAERKKKPLYFHHQGEVSTPVTPQ
NKSRRRPRVGQHSDTTSPENEETATNRLATRALYDTEEEEDENDQSGLWNSSSGSESSDY
SDWVGDNNTTSLQPPKRTSLRRRKQRRMTSSEEEEEDQSDTNNDTTTTRRPRPQRKKPEP
KEKKPNKTTRRRQQIVKKMGGVEELPEEFRPPEWLTDTKPRKTPYVPQMGDEVMYFRQGH
ALYLQAVKRHNAYNVNSNKNQPWNKYPHLREQEYVKIVGIKYEVRPPRLCCLKLAFIDPE
TGKTSGGSFNIKYHDMSDVIDFLVLKQTYDVAMKRRWKANDRFRSMIDDAWWMGTIVSQE
PFQQEYPDSMFQCFNVHWDNGEIEKISPWDMEPIGTCQMPDEQGGGVPVTQEEVKSLMYT
PNSGEWPSCGRDAECERIIRCMEVVMEHSIAEPFLTPVDLNAFPIYAIVIEYPIDLTTIK
SRLENRFYRRVNSLQFDVRYIENNANTFNEPGTPIVKSAQMATEILLRIISDEDCIDPHS
IISGLCQGEEFNWSSTTSDSDREENSQTRKRKRGDSDTPRKRQKTEQRHKTINSWKEECL
QLLVTMLHCEDSEPFREPVSVVNYPNYNSIIDEPMDLGTVKENLDNGEYSDPTELCKHIR
LVFHNSKVYNTNKRSRIYTMTLRLSAMFEEQIKDIVIDWKSAKKRMSRSRSMTENSRYTE
RRLTINSLSSEDLHDTSSARPGPSSSGLMSTRRTQRMLSSSTTQADDDDDEEIEVDVDTS
GPSTRSSHSNHVGKRTRKSGPKKTEPNHYDSETEVESDTEEEEDIQPSKSQRIRPSKAST
SKQTQNKVKGKMSVTSNGQHKTRASTGTIKPRRYCVDGSFTDDEKSLLKTASPSHSSSSS
SSSTEVESNDSSSSSSSSDSDSSYNSMDAKPQRPTRRSKHVRPSVKPRLKASDNGFVIDR
NKKKSNNNSKVKKTSNSATSSRRSKSSGTVQRTTRNQGRQTVRYQEDSEGEPEDSRGLEG
SGSGTDSDYSVGHERPDISTSSRGRVRKLTARARASLMGE
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgcctagcgagggttcctcagacgtatctctttccgctgttcagtcagaactttatttc
ctaatctcccggttcctcgcatcaggaccatgtcagcgggcttcagaggcattgaggcaa
gagctgaaagaacaccagcttttaccaaaaagagtcgactgggaaggcagacaacacgaa
agaagttatgaaaatttggtcaatcttaatcgccacatatcttcaagtcaccttctgcaa
atatgtcaacgtctgggccccctcctggacaaagaaatcaattcatctgcaacagggtta
caatcccttttaggcgctggaaaacagtccctcttgaggaccaaagaatcggtgcaccat
cctcgatggcgacccgaaaggcatttagctacccatcatcaccgatctttactgccacct
gtaaaccttgtggttccctcccttggtcatgtgacgaaggcccgagagataacgggacag
agtcggatggacctcatctgtcccatcttcatcttcactaaagtgagcatgcatgccagg
aagctggggcatctgtcagctgtgtactgtgtggccttcgatagaacaggccagtatatc
ttcaccggagctgatgatgcccttatcaagatttggtttgctgcaagtgggcgactgatt
gatacactcaggggacacaattctgaaatcacagacattgctgtgaattttgaaaacaca
ttactagcctctggtagctgtgataagatcattcgggtgtggtgcttaaggaccaaagct
ccagtagctgtattacaggcccatacaggaatgattacctcactacagttctgtcctcag
gccaggggagagtatcgtatactgtcctccacaggtggagatggctgtgtttgtttttgg
acctggaatgttaccacaaacaaattcaatccaaaaccagccaagtttatagagagatca
cgagctggagcccagatgttgtgttcgtccttcagtccagggggtgtgtttctggccaca
ggaagtgctgaccatgtgatcagagtgtatttcctgcatgtcacaacaccagaaaagatt
tgtgaattggaagctcatacagaccgtgtagatagtatctgctacagcaacagtggtgag
aaatttgtcagtggaagtagggatggaacagctcggatctggcgctacgaacgacaggaa
tggaaatctatcgttctctcaatgtcaacaaaactccccagttgtccaaaatcagagacg
gaagacaagggacagaagccacgcgtcactatggtcgcctggaacctagacgataactta
gtagttacggctgttaatgactgtagcctcaaagtttgggattcccaccatggcaagcta
ttacatgttttaaaggcccacgaggatgaggtgttcgttttagaacatagtcctacggat
cctagaatcttcctgagtgctggacatgacggatatgtcatcatctgggacctcaacact
ggcaacaagatcaaaagctacttcaacatgattgagggccagggacatggtgctgtgttc
gactgtaaattctgtcccgatggaaacagctttgttgccacagactctcatggacacctg
ctactgtttggatttggttccaacgaaaaatataaagagatacctcaggaattgttcttt
cacaccgactaccgtccattgatgcgtgacagcaataattacgttttggatgagcagaca
cagcagcctcctcacctcatgccgcctccattcctggttgatattgatggcaatccttat
cctccaaaattccagagacttgtccctggcagggagcattgtaaagacaacttactagta
cctcagatggctgttaatgaaacaggggaccaagaggttgtaggggagcgggtgacggag
gataatgacgaacaactgatgccccctcctgtggccccaaacaacctagatagcctcatc
gagcagctgcagcgtgaacaggacaatcgtttggctgcaagaggttctcaacgggtggca
aggtcaaattcagcgagtggtggcaaccatgctcacagggttggaatgagaatgagtgga
gaaactgagggagtgcggcagtcactaggcaacatcaaccagcaggccacccagtctgac
ctcgctgcctggagtagacgcatcattgtcaaggagctccacccttctgtactctcgagt
tgtgaagaaatgagaatggcccatgctgaaattgaggcaaagaggtttctggcggagaga
aagaagaaaccattgtatttccaccatcaaggtgaagtgtccaccccagtgactccacaa
aacaaatctcggcgacgtccgagggttggacaacattcagacaccacatcacctgagaac
gaggaaactgccactaacagactcgccacacgggcattgtacgatacagaggaggaggag
gatgagaatgaccagtcagggctatggaacagtagtagcggcagcgagtccagtgactac
tctgactgggtgggcgacaacaataccacaagcctacagccacccaagcgtacctctctc
cggcgacgaaaacagagacgtatgacatcatcagaggaagaggaggaggaccaaagtgat
acaaacaatgacacaacgacaactcggcgaccaagacctcagaggaaaaaaccagaacca
aaggagaagaaaccaaataaaacaacaaggagacgacagcaaatagtaaaaaagatgggt
ggggttgaggaacttccagaggagttccgtcccccagagtggctgactgacacaaaaccg
aggaagacgccatatgttcctcagatgggagacgaagtgatgtatttccgacagggtcat
gcactctatctacaagcggtcaaacgccataatgcctacaacgtcaactctaacaagaac
cagccatggaacaagtatcctcacctcagggaacaagagtatgtgaagattgttgggata
aaatacgaagtccgtcctccccgcctctgctgtttgaagctggccttcatcgacccagag
acgggcaaaacttccgggggttcatttaatataaagtaccatgacatgtctgatgttata
gatttccttgtgctcaaacaaacatatgatgtggccatgaaacggagatggaaagcaaat
gataggttccggtctatgatcgacgatgcatggtggatgggaacaatagtatcacaggag
ccatttcaacaagagtatcctgacagcatgtttcaatgtttcaatgtccactgggacaat
ggtgagatagagaaaatcagtccctgggatatggaaccaataggaacatgtcagatgcca
gatgaacagggaggaggtgtgcctgtgacccaggaagaggtgaagtcgctgatgtacaca
cccaattcaggggagtggccgtcatgtggacgggacgcagaatgtgaacgtattataagg
tgtatggaggtggtaatggaacattctatagcggaacctttcctcacacctgtcgatctc
aacgcattccctatctacgctattgttattgaatatcccatagatctcaccaccatcaaa
tccaggctagaaaacagattttacaggagagttaattccctacagtttgatgtacggtat
atcgaaaacaatgccaacaccttcaacgaaccagggacacctattgtgaaaagtgcccag
atggccacagaaatactacttagaatcatcagtgatgaagactgtatagacccacattcc
atcatatcggggttgtgtcagggtgaagagtttaactggagctccacaacctccgacagt
gaccgggaggagaatagtcagaccagaaaacgcaaacgtggtgactctgatacaccgcgg
aagagacagaaaactgagcagcgacacaagactattaattcgtggaaggaggagtgtctt
caactactggtcacaatgctccactgtgaggactcggaacctttcagggagcctgtcagt
gtcgtcaactatcctaattacaacagtattattgacgagcccatggacctaggaactgtc
aaagagaacttagataatggagaatactcggacccaacggaactatgcaagcacattcga
ctggtgttccataactctaaagtttacaacaccaacaagcggtccaggatttatactatg
actttaagactgtcagctatgtttgaagaacaaataaaggatattgtgattgactggaaa
tctgctaagaaacggatgtctcgatccagaagtatgacagaaaattcacgatatacagag
cggcgactaaccatcaatagtctgtcatctgaagatttacacgatacaagtagtgccaga
ccaggtccctcatcatcaggactgatgtccacacgacggactcagcgcatgctcagctca
tccacgactcaagctgatgacgacgatgatgaagaaatagaggtagatgtggatacatct
ggaccgagtacccgatcatcacattcaaaccatgtgggaaaacgcacacgaaaatcaggg
cctaaaaagactgagcccaaccattatgattcggagacggaagtagagagtgatacagag
gaagaagaggacattcaaccctcaaaatcccaacgaattcgtccttctaaagcctcaact
tccaaacaaactcagaacaaagtcaaaggtaagatgtcggtgacatcaaatggccaacac
aagacaagagcatccacaggaacgatcaaacctaggcggtactgtgttgatggatcgttc
accgatgatgaaaaatcattgttaaaaactgcatcaccatcacactcatcttcatcctca
tcgtcttcaacagaagttgaatctaatgacagtagttcatcaagttcatcttcagattct
gactcatcgtacaatagcatggatgccaaaccccaaagaccgactagaagaagtaaacat
gttaggccctcggtcaaacccaggttaaaagcttctgataatggatttgtgatagatagg
aacaaaaagaaaagtaataataattccaaagtgaaaaagacaagtaacagtgctacctca
tctcgccgatcaaaatcatctgggacagttcaacgaacgaccagaaatcaaggtcgacag
actgtgagataccaggaggacagtgagggtgaacctgaggattctcggggtctggagggg
tcagggtcaggcactgactcggactacagtgtgggacatgaaaggcctgacatcagtact
agtagtaggggtcgtgtcaggaaactcacagcccgggccagggcaagtctcatgggggaa
taa
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integrated database retrieval system