Pecten maximus (king scallop): 117327280
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Entry
117327280 CDS
T07399
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03013
Nucleocytoplasmic transport
pmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117327280
03015 mRNA surveillance pathway
117327280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117327280
03041 Spliceosome [BR:
pmax03041
]
117327280
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117327280
Spliceosome [BR:
pmax03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
117327280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
117327280
NCBI-ProteinID:
XP_033740087
LinkDB
All DBs
Position
5:15392238..15406431
Genome browser
AA seq
1187 aa
AA seq
DB search
MTDAGFFKGTSADQDNRFSDKKKKLMKSMKFSDELEKKVDMSKVNVDIIKPWIAQKVTDS
LGGYEDDVIVEFVYNQLEERYPDPKEMQINLTGFLNPKNARTFMHELWELLCSAQENIGG
IPEKFIAQKKEEIKKRQAEKERIQASLKKSEEQIKEALMKERKEQDNKEKERSPSHRKSR
SASPKPSKSSSDKNESENKDVAELQGGKDSTTSEAKTHENGEKAENDDKEKNAANHKDGD
KEKDVVKDETKEAEKKKKSRSPSPSRKRRSRSRSGDRHRRRKSRSRSKRRSPGRKRSRSR
SRRRSPRRSRPSPRRRSSPYRRRGSSPRRRRSLSPRHRRRPSPRRSPSPRRRSPRRRPPS
PRRDRSPIRRRRSPSPDRRKRAPSNSSGSSSGSEDSSPRKPSGRPSSSPGKGDSSADNAD
SPGKQGVQKRRNYRTHDQDAKSDTSSSSDDSSSEDEAPAVRGHDRDGPPSYGRNMRRSMS
RERRRPSPYSRRFSPPRRPSPGPWYGGRRSPPRYSPPWRQYRRSPSPPHLRMDRRRMGHS
PSRSPPPYQGRRMRSPPGRFSDEMNRRRLSPPDRRHQYSPSPPPQRRRRMSPDSPPPRQR
RMPPDDSPLRRRRRNVSNSPEPTRWHADREDSSSSPPKLKKERSPPPRGRKRSPDSPPRK
RKVIPKRERVSDSESPPPLPREQQQSESESSSGSPEPPPQRRKGKPTRSVSGSPSPQRVT
RKKISPSPQQRKVREQGSPPQRRRKQDSPPPKLRKRDTSEDSSSSSEGEASSDSAPPPPR
QAKRPQKSASPGPRRSPVPKRKQRSPSPEIQQRRRHSPQRSSPVRFQKKRQQMSPSPSPS
PPPKRRDSRMKDSPERTRHARQQSPAQRRKQSGSPVRQRRRQSGSPPPQKRRQSDSPPAQ
RRRPSVSPPPQRGRPSASPAQRGRQSGSPPPPRQKRRQPSDSPPPPRRKRQSDSPSPQRR
RDSESPPIQRRKRSESPPQRRRKPSNSPAQRGRPSPSPPFQRSKQTRSPPAARRQRESPS
PDAPRQRRGRPSPSPEPVPRGWGDESRSGHGREYRGEDVQRTITINQGKRERDGEISPAP
QSNRGGGFMDGEDSLKRRTKDKSPMSGSDFEMSDDAAGKKKKKKEKKKHKKHKKHKKHKH
KKNKDGEIEEGGSDSDEEPAELEERKLRERALQSMQKANLKASEMSS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgcgggattcttcaagggcactagtgccgaccaggacaacagattctcagac
aaaaagaagaagttgatgaaatctatgaagttttcagacgagttagaaaagaaggtggat
atgtcaaaagtgaacgtcgacatcatcaagccatggatagcacagaaagtcaccgactca
ctcggcggatacgaggatgatgttatagtggaatttgtttacaatcagttggaagaaagg
tatccggatccaaaagagatgcagatcaacctgactggcttccttaacccaaagaatgcc
cggacctttatgcacgaattgtgggagctcctttgcagtgcgcaggagaacattggaggg
attccagaaaagttcatagcacagaaaaaggaggaaattaaaaagagacaagctgaaaaa
gaacgaatccaggcaagtctaaagaaaagtgaagaacagatcaaggaggcactgatgaag
gaaagaaaggagcaagataacaaagaaaaagaaagatctccgtcacatcgaaaatcgagg
agtgcctcacctaaaccaagtaaaagcagcagtgataagaatgaatctgaaaataaagat
gttgccgagctgcaaggtgggaaggattcgacaacatcagaggctaaaacacatgaaaat
ggggagaaggcagagaatgatgacaaagaaaaaaatgctgcaaatcataaggatggtgac
aaagaaaaagatgtggttaaagatgaaaccaaggaggcagaaaagaagaagaagtcgcgt
agccccagtccaagtcgcaagagaaggtctaggtctagatcgggggatcggcatcggcga
aggaaatctaggtcaaggtcaaagaggcgatcaccagggaggaaaaggtccagatctcga
tcaagacgtagatcacctcgacgttcaaggccatctcctaggcgtagatcatctccatat
cgcagaagggggtcatctccaagacggcggcgttcactatcaccaagacatcgtagaagg
ccttctccacgaagatcaccttcacccagacgtcgttctcctcgaaggcgtcctccttca
ccgaggagggacaggtcaccaattagacgtcgccgttcaccaagcccagaccgcaggaaa
cgtgccccaagtaacagctctggttcttctagtggatcagaagactcatcacctcgaaaa
ccatctgggagaccatcgtcttctccaggaaaaggggatagtagtgctgacaatgctgat
tctcctgggaagcagggagtacaaaaaagaagaaattatcgcacacatgatcaagatgca
aaatcggacacttcctcatcttcagatgactcatcatctgaggatgaagctccagctgtg
agaggccatgaccgtgatgggcccccctcatatggtcgtaatatgcgcagatcaatgtcc
agagaaagaaggcgcccttcaccttattccaggaggttttctcccccaagaagaccaagt
ccaggtccctggtatggaggcaggaggtctccacctcggtattctccaccttggcgacag
taccgccggtcaccttcaccacctcatctaaggatggacagacgcagaatgggtcactct
ccctcaagatctccgccaccataccagggaaggaggatgaggtcaccaccaggcagattc
agtgacgagatgaaccgacgaagattatctcctcctgatcgtcgtcaccaatactcaccc
tctccacctcctcagcgtcgaagaaggatgtcaccagactctcctcctccacgtcagaga
aggatgccaccagacgattcgccactccgccgaaggagaagaaatgtatccaactcccct
gagcctaccagatggcatgctgacagggaagattcatcatcttcacctcctaagctgaag
aaggagcgatccccgccaccgagaggaaggaaaaggtcacctgattcacccccaagaaaa
agaaaagttatccccaaaagagaaagagtctctgattcagagtctccaccaccacttccc
agagaacaacagcagtctgagtctgaatcatcatctgggtcaccggagcctccacctcag
agaaggaaaggcaaacccacaaggtctgtctccgggtctccttcaccacaacgtgtgaca
cgaaagaagatctcaccatccccacagcagaggaaagtcagagagcaagggtcaccgcca
caaaggagacgtaaacaggactctccgccgcccaaacttaggaagagggatacatcagag
gattcttcttcctcatcagaaggtgaggcatcttccgattccgctcctcctccccctcga
caagcaaagcgacctcagaagtctgcatcacctggccctcgaaggtcacctgttccaaaa
agaaagcaaagatctccgtcccctgaaatacaacaaagacgtagacactccccgcaacgt
tcctctcctgtccgttttcaaaagaaacggcagcagatgtctcccagtccttcaccatca
cctccaccaaagcgccgtgactcccgtatgaaagactctcctgagagaaccagacatgca
aggcagcaatctcctgctcaaagaagaaagcaatctggatctcctgtccgacagagaaga
agacaatctggctctccacctccgcaaaagaggagacaatcggattctccacccgcacaa
aggagaagaccgtctgtatcgccaccaccacaaagggggaggccatctgcatctccagct
caaagggggagacaatccggctcaccaccaccaccacgacaaaagaggagacaaccatct
gattctcctccacctcctcgaaggaaacgacagtctgattccccctcccctcaaaggaga
agggattctgaatcacctcccatacagagaagaaaaaggtcagaatctccacctcaaaga
aggagaaaaccatcaaactcacctgctcaacgaggtagaccatctccctctcctcccttt
caaagaagcaaacagacccgctctcctcctgctgccagacgacagagggaatcaccatcc
cctgatgctccacgtcagaggaggggtaggccatccccaagtcctgagccagtacctaga
ggttggggagatgagagtaggtcaggtcatggaagggagtacagaggtgaggatgttcaa
aggaccattactatcaaccaaggcaagagagagcgtgatggagaaatttctcctgcacct
caatccaacaggggtggaggctttatggatggtgaggacagtcttaagaggaggactaag
gacaagagcccaatgtcagggagtgactttgagatgtcagatgatgctgcaggcaaaaag
aaaaagaagaaggaaaagaaaaagcacaagaaacacaagaagcacaaaaaacacaagcac
aagaaaaataaggatggggaaattgaagaggggggatcagacagcgatgaggaacctgcc
gagctggaggagagaaagctgagagagcgagctctacagtccatgcaaaaagctaactta
aaggcatccgagatgtcaagctga
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