Pecten maximus (king scallop): 117327597
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Entry
117327597 CDS
T07399
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117327597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmax03400
]
117327597
DNA repair and recombination proteins [BR:
pmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
117327597
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
LXG
TPR_HPS5_insect
Motif
Other DBs
NCBI-GeneID:
117327597
NCBI-ProteinID:
XP_033740541
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All DBs
Position
5:complement(23932757..23961711)
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AA seq
929 aa
AA seq
DB search
MALQPKQELQLDGIQEQGFLSFHRSLPEKSSTTLRVFDRNDYYTVHGMDAVFVAKDVYKT
TGVIKMLGAGEKKLESVVLSKMNFESLVRDLLLVRQYRVEVYRNKGGSKNNDWSLAFKAS
PGNLTQFEEILFGSTDMSTSAGVIAVKIGTDTGQRLVGVGYADATLRKFMVSEFVDNDQF
SNLEALIVQLGPKECLIMSGEIGADAGKLKQVLDRSGLLVTERKKSDFSSKDVTQDLNRL
LKFKKGEQGNSATLPETEKAQAMTSLSALIKYLELLSDEENFAQFSMSLFDLSQYMKLDA
AAVRALNLLPSTVEGGNKNQSILGLLNKCKTAQGQRLLSQWVKQPLVDLNKIEERLNVVQ
VFVEDSELRQTLQDEQLRKIPDFQRLAKKFQRKRATLQDCYRVYQALDKMPYLLEVLEKH
EGEHQTLLMELFTNPAKELLMDFAKFQEMIETTMDLAQIENHDFVIKADFDEGLAALREK
IDELEDSIKGQMNKVARDLGLEPNKVLKLESNSQLGYFFRVTRKEEKALRNNKNYMTIDT
KKDGVRFHNNAVRRMNEEYLKAKEDYNEQQKSVVLEIITIAAGYVEPMLLLNDIIAQLDV
LLSFAHVAVSAPVAYVRPKLLAKGSGIIQLTEARHPCLEMQDDVAFIPNDANFTKDKQMF
HIITGPNMGGKSTYIRSVGVVVLMAQIGCYIPCAEGEITIVDSILARVGAGDSQLKGVST
FMAEMLETASILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIKAFCLFATHF
HELTALSDVVPTVNNLHVTALTTNDTLTLLYRVKPGVCDQSFGIHVAELAHFPKNVIEFA
KNKASELEDFQNVCLSGTGLEGDSEPAVKKRKVVKEEGEDIIKDFLSKVKKLPLSSLSPD
EAITELNKLKACVKEKNNPYVEDVISRGK
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctctacaaccaaaacaagagctgcaactagatggcatacaagaacagggatttctt
tcatttcacagatctttaccagagaaatcaagtacaacccttagagttttcgacagaaat
gactactacacagtccatgggatggatgcagtgtttgttgccaaggatgtttacaaaacg
actggtgttatcaaaatgcttggagcaggtgagaagaagcttgaatccgtggtcctaagt
aagatgaattttgagtccttggtgcgtgatttgttactagtccgacagtatcgtgtggag
gtatacaggaacaagggtggctccaaaaacaatgactggtcacttgcattcaaggcctct
cctggtaacctgacacagtttgaggagatcctgtttggaagcacagacatgtctacatct
gcgggagtaatagctgtaaagattggcactgatacaggccagcggctagtaggggttgga
tatgctgatgctacccttaggaagttcatggtcagcgagtttgtggacaatgatcaattc
tctaacctagaggcattaatagtccaattgggaccaaaggaatgtcttatcatgtctggg
gagattggtgctgatgcaggcaaactgaagcaagtgctggatcgaagtggtttattggtg
accgagcgcaaaaaatctgacttttcctcaaaagatgttacacaagatctgaacaggcta
ttgaaatttaaaaaaggagaacaaggaaatagtgctactttgcctgagacagaaaaggca
caggcaatgacgtccctctccgctctgattaagtatttggagttattgtcagatgaagaa
aacttcgctcagtttagcatgtccctgttcgatttaagtcagtacatgaagctggatgct
gcagctgtgagagccctgaatctactccccagcacagtggaaggtggaaacaaaaaccaa
agtattcttggattactgaacaagtgtaaaacagctcaaggccaaaggttgctctcgcag
tgggtcaaacaaccccttgtggacctcaataaaattgaggagagactgaatgtggtgcaa
gtgtttgtggaggactcagaactgagacaaacattacaggatgaacagctaagaaaaatt
ccagatttccagcgattagccaaaaagtttcagagaaagagagcgacgttgcaggattgc
tatagagtgtaccaggccttagacaagatgccttacctgctggaagtattggagaaacat
gaaggagaacaccagacactgctcatggagctgtttactaacccagccaaggaattattg
atggactttgccaagttccaggagatgattgagacaacaatggaccttgcccagatagaa
aaccatgatttcgtgattaaagctgattttgatgaaggccttgcagcgctgcgagaaaaa
attgatgagcttgaagacagtatcaaaggtcagatgaacaaggtggcaagagatttggga
ttagaacctaacaaagtcctcaagcttgagagtaacagccagctgggatattttttcagg
gtcacacgcaaggaagaaaaagcactgagaaacaacaaaaactacatgaccattgacaca
aaaaaggatggtgttaggttccacaataatgctgtgcgccgtatgaatgaagaatacctg
aaggcaaaggaagactataacgaacaacaaaagagtgtggtgttggagattattaccata
gcagctggatatgtagaacctatgttactgctgaatgacataattgctcagttagatgtg
cttctgagtttcgcccatgttgctgtatccgcacctgttgcttatgtacgaccaaaattg
ttagccaaaggtagtggtatcatccaactgacagaggccaggcatccttgccttgagatg
caggatgatgttgcatttatacccaatgatgctaatttcacaaaagacaaacagatgttc
catatcataactggcccaaatatgggaggaaaatcaacgtacatccgctctgtaggagtg
gtagtgctgatggcacagatagggtgctacattccttgtgctgaaggggagatcaccatt
gtagacagtatacttgctcgcgttggcgccggagatagtcagctcaaaggagtgtctact
tttatggcagagatgttggagaccgcctcaatcctcaggtcagcaacagaagattcctta
attatcatagatgaattaggaagaggaacatcaacttatgatgggtttggtctcgcctgg
gcaatatctgaatacattgcaaccaaaattaaggcattttgtctctttgctacccatttt
catgagctgacagcactgtcagatgttgtgcccaccgtcaataacctgcacgtcactgca
ctcacaaccaatgacactctcaccctgctgtacagagtcaaaccaggtgtgtgtgatcag
agctttggtatacatgtggcagagctggctcacttccctaagaatgttatagagtttgcc
aagaacaaagctagcgaactggaggattttcagaatgtttgtctgtctggtacaggcttg
gaaggtgattctgagccagctgtcaagaaacgaaaggttgtgaaagaggaaggtgaggac
atcatcaaagacttcctatcaaaagtgaaaaaattgccgttgtccagcttatccccagac
gaagccatcacagaattaaacaaactcaaggcctgtgtgaaagagaagaataatccatat
gttgaagatgtgatttccaggggcaaatga
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