Pecten maximus (king scallop): 117327738
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Entry
117327738 CDS
T07399
Name
(RefSeq) nucleoporin Nup43-like isoform X1
KO
K14305
nuclear pore complex protein Nup43
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117327738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117327738
03036 Chromosome and associated proteins [BR:
pmax03036
]
117327738
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117327738
Chromosome and associated proteins [BR:
pmax03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117327738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
Beta-prop_EIPR1
WD40
WD40_CDC20-Fz
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
fn1
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
117327738
NCBI-ProteinID:
XP_033740752
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All DBs
Position
5:29099383..29112941
Genome browser
AA seq
393 aa
AA seq
DB search
MADTRATFVSHKINKIRWRQQQKQSLQESDVFASGSWDDEQNKVCLWKVERQTAQSGEMD
DGGGTGYVESDPVILCEAPHRGDVTGLEYMDQEHIVASSSTGTITIYKHHTNSQTLGVSQ
QWEKVHNHYGQLCPCTCLAIRDDVIVSSGEDGRVNIIQVGHKTPNRVIDKADSSTVNSIT
FLKQTEFITVNSTGQLKIFDLRTNSDEPTQTLSVTGELTPLQCIDKHPSQAHIVATGGQD
GVLGMWDLRHDKFPVSLMEAHSGTVWEVRFHPSAPDHLFTCSEDGCVWHWDGSQVNATPI
GMVAGINQITGTGAGSGGGNLSTPRQFQYGGNTAAAGLSNPWLATDIAKNKIEITSLLDQ
KSLPINTVDVAGHTLLCGTDGETIFTMNLGSLR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacgagggcaacattcgtgtctcacaaaatcaacaaaatacgatggagacag
cagcaaaaacagtctcttcaggaatcagatgtttttgcaagcggaagttgggacgatgaa
caaaataaggtatgtctgtggaaggttgagagacagacggcacagagtggggagatggat
gatggaggagggacaggctatgtggagagtgatccagtgatcctgtgtgaggccccacat
agaggagatgtcaccggtttagagtacatggatcaagaacatattgttgcatcttcttca
actggaaccattactatttataaacaccatactaactcacagaccctaggagtgtctcaa
caatgggaaaaagttcataatcactatggacagctttgtccttgtacatgtttggccatc
cgtgatgatgtgattgtgtcgtcgggagaggatggacgtgtcaatataatacaagtggga
cacaaaacacccaatagagttatagataaagcagatagcagcactgtaaatagtattacc
ttcctgaagcagacagaattcatcacagtcaattctacaggacaactgaagatatttgat
ctaaggacaaattctgatgaaccaacacaaactctttctgtaacaggggagttaactcct
ctccagtgtatagacaaacacccaagtcaggctcacatagttgcaacaggtggacaggat
ggtgtgctgggaatgtgggacctgagacacgacaagttcccagtctcattgatggaggca
cactctgggacagtgtgggaggtgaggttccacccatctgcacccgaccacttattcacc
tgttccgaggatggctgtgtgtggcactgggatggctcacaggtcaatgctacacctatt
ggcatggtggcaggcatcaaccagataacaggtacaggtgcaggatccgggggaggtaat
ttatcaacaccacgacagttccagtatggcggtaacacagctgctgctggtctttctaat
ccttggctggccactgacattgccaaaaacaaaattgagatcacctcattacttgatcaa
aaatcactgcctataaacactgtagatgtggcaggacacacactgctgtgtggcacagat
ggagagacaatattcacaatgaatcttggcagccttcggtaa
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