Pecten maximus (king scallop): 117327824
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Entry
117327824 CDS
T07399
Name
(RefSeq) SR-related and CTD-associated factor 4-like isoform X1
KO
K13191
RNA-binding protein 16
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmax03021
]
117327824
03041 Spliceosome [BR:
pmax03041
]
117327824
Transcription machinery [BR:
pmax03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117327824
Spliceosome [BR:
pmax03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117327824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
117327824
NCBI-ProteinID:
XP_033740913
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All DBs
Position
5:33022367..33045575
Genome browser
AA seq
1376 aa
AA seq
DB search
MEAVRAFNNELSSLYETRPPISRAKMANVTKGAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGSDKDVFAPRFTKNVVATFQNLLKCPNEEKSKVIRVLNLWQKN
GVFQSEIVQPLLDLAVDSNDMNLVAAAQRAVDNLSANKAGPSAAPQAVPPQPNTAEGSGE
GMEMSSQNDMLNTVTQLLQQTQTVGYDSGTTSLSAQQQQLQQLQLLQQQLIQQTQLMQQA
PSQQGSSHAIDSNLLSHIQTLTNQLLNKTDKSTEGGFNKKLLDFDYGESDDEDEHGMPGG
GGGGGVPNLLNDPAFLQQIQQMSQTIQKTEQIQNELSMQKLLQQQAEFDQQIRQPQMSQI
PSLMPPEPHPPPPMQPGYPMMPDHQPPSDDYQDIDERTQEPMEEERHREDRDRDRKHRRS
KQSSRDRSRSRTPKRRRRTRSRSRDRRRRSRSRDRHRRSRSRDREREKQRERERERRKKG
LPAIKEECLSICTTTLFIGHLAKSTSEEELREELDKYGTVETLHIIPPRGCAFVCMSRRK
DANKALDRLKGYKLNGSDLRVAWAPGIGVKESEFRDKWDVDAGTTYIPWSKLPDDLSNLI
EGGIIDEETLPEHLKGSLIGREKPDIVEEQTQQAPPPHPPLPNNQGPPPMGLPGPPTSGP
PGGQFPPPVPGMLPPTSVMQHMGVMQHMMVQGGLPGQMPAMPPQMTMAGMPPQLQSSQGI
PSVPGMIPLPSGMPTVRPQIGQISSAGGLTQITSSAGIPPSSVGSLFTSTGGLPHVSEAA
INAALRPGFPAGAGFPQRFGINLPPGQGFRMPLFNPTQGVIQQPQLQPKPSLLGIRPPFN
VNPADKKEEKPSLLGRPPGDWQQQSKPQPPPDFSDDLDTDDRDIRENAGSGSQSKQEFGG
MPPFGSQGVPAATSQDNMNQSGHPPGAGRGMGPGLGHPPNVGMAPPNFRGPRPLMDMNGP
MGPGMGPRMGGPPDGSNRFMSPRGPMPGNMGPRGYQGGPPGPGGPGGPRAGFIGNRPGMP
FQRFPGNFQPRPGFRGPPGDMMRPRFDMGGRMNAHDGELRNDEEEDNFRKEEKFDRGHPP
FGKEESGPPGKNWGDNDDKEDDFQDGGGFRRDFNRRDRGGRGGRRGRGRDSFGGRDDRRG
DFDRRDRRDDRYNRDDRGRSDWGNRDRGGRDRRDRDQDGPSFRDRGRDRDEEQENVGFRD
RGRERDNEQEGPGFRDRGRDRDSEQEGGFGRDRGRDRRERDNRDQERDRGARRASRWSDV
TDVELQESTPTLTGVLPDKRVEEGEVGGTKDEEVSAPQEEGEVTSAPAPLPPAVINEPDS
VVTKVNGPELEKEAEHAPPSENIVPVVKPVTNGESEPKPEVPPTRDPESLEEGEIE
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagtaagagccttcaacaatgagctctcttcattgtatgagacccggccacca
atatctcgggcaaaaatggccaatgttactaaaggtgcaataaaggccatcaagttctac
aagcatgttgtgcagagtgtggaaaaatttattcaaaagtgtaagccagagtacaaagtt
ccagggctttacgtgatagattctatagttcgacaatctcgtcaccagtttggatcagat
aaagatgtatttgcaccaaggtttacaaaaaatgtagttgctacgttccaaaatttactg
aagtgtcccaatgaggaaaagagtaaagttatcagagtattaaacttgtggcagaaaaat
ggtgtttttcaaagtgagattgtacaacccttactggatctagctgttgactctaatgac
atgaatcttgtggccgcagctcaaagagctgtggacaatttgtcagcgaataaagctgga
cccagtgcagctcctcaagcagtaccaccccagcccaatactgctgagggaagtggtgag
ggtatggaaatgtcttcacagaatgacatgctcaacaccgtcacccagctacttcagcag
acccaaacggtagggtatgactcgggaaccacaagtctcagtgcccagcagcagcagtta
caacaacttcagctactgcagcaacagttaatacagcagacacagttaatgcaacaggcc
ccttctcaacagggatcatctcatgctattgacagcaatcttctctcccacatacagact
ctcacaaaccagcttctcaacaagactgataagtccacagaaggaggattcaataagaaa
ttattagatttcgactacggtgaaagtgatgatgaagatgagcatgggatgccaggtgga
ggagggggtggtggagtgccaaatcttttaaacgatccagctttcttacaacaaatacaa
cagatgtctcaaacaatccagaagacagagcaaatacaaaatgaactgagcatgcagaaa
ctattacagcaacaagctgaatttgaccagcaaattagacagcctcaaatgtcacagatc
ccctcccttatgccccctgaaccacaccctccccctcctatgcagcctgggtacccaatg
atgcctgaccatcagcctccatcggatgattatcaggatattgatgagcgaactcaggag
cccatggaagaagaacgtcacagagaggatagagatcgggaccgtaaacaccgtagatca
aagcaatcttcaagagatcgatctcgctctagaacacctaaaagaagaagacgcacaaga
tctcgttctagagacaggcggagacggtcaaggtcacgagataggcatcgcaggtcaagg
tcccgtgacagggaaagggagaaacagagggaacgcgaaagagaaaggagaaagaaaggt
ttaccagcaatcaaagaggaatgtcttagcatctgtaccacaacgctcttcattggacat
ttggcaaaaagcacatcagaagaagagttacgggaggaacttgacaaatatggaaccgtg
gaaacacttcatattatacctccaagaggatgtgcatttgtgtgtatgtcaaggaggaaa
gatgctaacaaagcattagacagattgaagggatacaagctcaatggatctgatttgagg
gttgcttgggctccaggcataggtgtaaaggagtcggaatttcgggataaatgggatgtt
gatgcagggaccacatacattccctggagcaaactgccagatgatctcagtaacttaata
gagggtggaatcattgatgaagaaactttaccagagcacctcaaaggctctcttattggg
agagaaaagccagatattgttgaggaacagactcaacaggctcccccacctcatccacct
ttacccaacaaccagggaccaccacctatgggactaccaggaccccccaccagtgggcct
ccaggaggccaattcccaccgcctgttccaggtatgttgccccctacctctgtcatgcaa
cacatgggagtgatgcagcacatgatggtacagggtggacttcctggacaaatgccagca
atgccaccacaaatgacaatggcaggcatgccccctcaattacagtcaagtcagggcata
ccctcagtacctggcatgatacccctcccaagtgggatgccgacagtcagacctcagatt
ggtcaaatatcctctgcaggaggcttaacacagatcacatcatctgcaggaatacctccc
tcctctgtgggtagtttgttcactagcacaggtgggcttccccatgtgtctgaagctgcc
atcaatgctgctctgcgcccgggatttcctgctggggcaggattccctcaacgctttgga
atcaatctgccaccaggacaaggctttaggatgcctctcttcaatccaacacagggtgtt
atccaacaacctcaactacagcctaagccatctctgttgggtataagaccaccatttaat
gtgaatcctgccgataaaaaagaagaaaaaccgtctctactcggtcgccctcctggtgac
tggcagcaacagtctaaacctcagccaccaccagatttctcagatgatctagacactgat
gatcgtgatattagagaaaatgctggtagtggttcccagtcaaaacaagaatttggtggt
atgccaccatttggatctcagggagtgccggcagctacatcacaagacaatatgaatcaa
tctggccatcccccaggggcaggtagaggtatgggaccaggtcttgggcacccacctaat
gttggtatggctccccctaattttcggggacctagaccattaatggacatgaatggaccc
atgggccctggcatgggtccaagaatgggaggaccaccagatggatcaaacaggttcatg
agtccaaggggaccaatgccaggcaacatgggacccagaggataccagggaggtcctcca
gggcctggtggacctggaggacccagagcaggtttcattggcaacaggccagggatgcct
tttcaaaggttccctggtaattttcaaccaagacctggttttagaggacctcctggtgat
atgatgagacctaggtttgatatgggaggcagaatgaatgcccatgatggggaattacgt
aatgatgaagaggaggacaatttccgtaaggaagaaaaatttgatagaggacaccctcct
tttggtaaagaggaaagtggtcccccaggaaagaattggggagacaatgatgacaaagag
gatgactttcaagatggtggtggatttagaagggacttcaatagaagggatagaggagga
cgaggtggaagacgaggaaggggtagagatagttttggcggtagagatgatagacgggga
gattttgatagaagagacagacgtgatgacaggtataacagagatgaccggggaaggagt
gactggggaaaccgtgatagagggggaagggatagacgtgacagagaccaggatggtcct
agcttcagggataggggacgtgacagggatgaagagcaggagaatgtgggattcagagac
aggggtagggaaagggacaatgaacaagaaggtcctgggttcagagataggggacgtgat
cgtgacagtgagcaagagggaggttttggcagagatcgaggtagggataggagggaacgc
gacaaccgtgatcaggaacgtgacaggggagcaaggagagcaagtagatggagtgatgtg
acagatgttgaacttcaagaaagtacacccactttaacgggagtgttacccgataaacgt
gttgaagagggtgaggtaggaggtacaaaggatgaagaggtgagtgcacctcaggaggaa
ggggaggtaacaagtgcccctgctccactcccacctgctgtaattaatgaaccagacagt
gtagttactaaagtgaatggtccagaacttgaaaaggaggccgaacatgctcctccttca
gaaaatatagtgccggtagttaaaccagtgacaaatggagaaagtgaacccaaacctgag
gtacctcctacacgagacccagaatcattagaggagggcgagatagaatga
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