Pecten maximus (king scallop): 117327828
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Entry
117327828 CDS
T07399
Name
(RefSeq) uncharacterized protein LOC117327828 isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117327828
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117327828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
KH_N4BP1_1st
UBA_N4BP1_C
PRORP
zf-CCCH
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
117327828
NCBI-ProteinID:
XP_033740919
LinkDB
All DBs
Position
5:33090124..33112076
Genome browser
AA seq
1264 aa
AA seq
DB search
MNTDDVKVVGSKLPLILGAKEHIECLFGVCVVLPPNHDDFLIGNDSKDVCEESRCTNILL
SSEISSENVQKAKNYISSLTAEGEESATFTINLTGPSLTMLIESRDSIEQCSQAVLELNR
EADILRVYGKVDSVRSAKLMIDMMLSKSEVDSSLNVRTRKDNGDGNDESNDVSARTAENT
LQSEPEVQTLQELTDGEDIGCCRENVRTLVSEDDSSLQTDSEPVTCHSFVHVGFSDNFLK
RGCDSVPTRDLDDVSDLTVDTEVLKDELCTQSDAQLIDTQLTHLSLSSPHTELKSSSDEE
VERLHSVVEYDGKVEFALKLGYTENQLTTVINKLGHEASQNEILSELIKLGKCGIPDDES
RLDSLECDSGLKITESHTRTAPLSPHHSSPDHLGRELEFVDKFRPVVIDGSNVAMSHGNK
EVFSCRGIELAVEWFRMRGHTEITVFVPQWRKETSRPDSKIRDQNILMHLEKEKVLVFTP
ARRIGGKRVVCYDDRYILKLAAETGGIVVSNDNYRDLLNENPEYKKVVEERLLMYSFVND
RFMPPDDPLGRHGPSLDNFLSREPTVPVSLPPVCPYGSKKCTYGNKCKFYHPERGNLPQK
TVTETLAEQTKQKMQDLMERGSKSGEGDKKKVPVRKQPLKPKLSLQRTQSLVPMEPLANR
PPPDFSDLAADNPPPPKSEQTIQSSEKTEKWKSYDDKLTGFRKKMEQAEQEEKQRQEEGA
SSDAETSSLKMLPTSESLHTPLSTSDHISSRSSSPLQRSSPTQPIKPQEQFLSGHLLLAK
KLSDEAADKKVRQKVSEERDHTRTPPTDLQQSRTALHRCNSPLAQFSQPQMQNQTLSHQM
LSPEQQPQPRHQKLSRQLSLQGANDPRTHRSLQQQLSYDPRYSSQQTYQRRPQPIPGRQQ
GFYDLRGSENFGNVSVGAVDSGMRHTMQNIQQDTRACNEPFFSGSSGRHLNVEHATLARM
QSAPEVPQLRSAAAAPPIARMVRQNSNSDTQLHIIGGEMEQTDYNFSEFQGGRSDYQQGD
GFSSSYVPRGPGFEVHHQPVAHQFNRGFTHGVPSYPHSQGYTQPQKHHAGNTTWSFSDQG
FAPGQIKQPAQFPGFHRHAPIQHSRSYQMMQSRPSQPNESYTERDPNFHTGILTKREDDI
WGPSVASTSSSSVFSQNYAQGDNRYGDIPRSRSGMASPVSEQNRGHVGQSNTSSNSHTRS
TVETPSAPSPLIAEDAPIHRNDSRYSLYYHLCGLFPEQKVRTVMNEHPDQTDPQELCAYI
IGAK
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagatgatgtgaaagttgtaggatccaaattacccctgatattaggcgctaag
gagcatatagaatgtttgtttggggtgtgtgtggtcttgccaccaaatcacgatgacttc
ctgattggtaatgacagtaaagatgtttgtgaggagtctcgttgtacgaatattcttttg
tcgtcagagatttcatcggaaaatgttcaaaaggcgaaaaactacatttcatctctgact
gccgaaggagaggagagcgccacatttacaattaatttaacaggaccttcattaacaatg
ctgatagaaagtcgggactcgatagagcagtgttcccaggctgtgctggagctcaatcgg
gaggccgatatactccgtgtctacggaaaagtagacagtgtcaggtcggccaagttaatg
atagacatgatgctgagtaaaagtgaagttgattcctcactgaacgtacggacaagaaag
gataatggcgatggaaacgatgaaagtaacgatgtttcagcaagaacagcggaaaatacg
ttacagtctgaaccggaagtgcagacattgcaagaattaaccgacggtgaggatattggg
tgttgtagggaaaatgtacgaacacttgttagcgaagacgattctagtttgcaaactgac
agtgaaccagtaacatgtcattcctttgttcatgtggggttttccgacaatttcttaaaa
cgaggttgtgattccgttccaacgcgagatttggacgatgttagtgatttgacagtcgat
acagaagtacttaaagatgagttgtgtacacaatcagacgcacagctcatcgatacacag
ttaacacacctcagtctatctagtcctcataccgaactcaagagctcttctgacgaagag
gtagaaagactccacagtgttgtagaatatgatgggaaagtagaattcgccttaaagtta
ggctatacagaaaatcaactgacaactgtgataaataaattaggccatgaagccagtcag
aatgaaattctatcagaactcataaaattgggaaaatgtggaattcccgatgatgagtct
agacttgattcattagaatgtgactctggattaaaaataacggaaagtcacacgagaaca
gcaccactgtctcctcatcacagcagtcctgatcacctgggacgggagttggagttcgtc
gacaaattcagaccggttgtcattgacggtagtaatgttgccatgagtcatggaaacaag
gaggtattctcatgtcgaggtattgaattggctgtggaatggttcagaatgcggggtcac
actgaaatcacagtgtttgtgccccagtggcgcaaggaaacatcacgaccggactccaaa
ataagagaccaaaatattctcatgcatctggagaaagaaaaggtgttggtgttcacgccg
gccaggagaataggcggcaaacgtgtcgtctgctatgatgatcgttacatccttaaactg
gctgcagaaacagggggcatcgtggtttctaatgacaattacagggatcttctgaacgag
aatccagagtacaaaaaggtcgtagaggaacgacttctcatgtactccttcgtgaacgac
agattcatgcctcctgatgatccactcggtagacacggacctagtctggacaacttcctg
agtcgcgaaccaacagtccccgtgtccttacccccggtctgtccgtatggcagcaagaag
tgcacctacggcaacaaatgcaagttctaccacccagagcgaggaaatcttccacagaag
actgtcaccgaaacgctagctgaacagacaaagcagaagatgcaggacttgatggaaaga
gggagcaaaagcggggaaggcgacaagaagaaagtaccggtccgaaagcagccattaaag
ccgaagttgtcactacagcgaactcaatctctagttcctatggaacctttagccaacagg
cctcctcccgacttcagtgacctagctgcggacaatccaccaccacccaagtcggagcag
acaattcaaagttcagagaaaactgaaaagtggaagtcgtatgatgacaaactcacgggt
ttcaggaaaaaaatggaacaagcagaacaagaagaaaagcaacgacaggaggaaggtgct
tcttcagatgcagagacgtcttcattaaagatgctaccaacaagcgaatctttacatact
cccctgtcgaccagtgatcatatcagttctcggtcgtcttcacctttacaaagaagtagt
cctacgcaaccgataaaaccacaggaacagtttctaagtgggcatcttcttttggcaaag
aagctttctgatgaggctgcagacaagaaagtgcgacagaaagtttcggaggagcgagac
cataccagaacacctccaacggacctacaacagtcgcgaacggctttacataggtgtaac
tcccctctggcacaattcagtcagccacaaatgcaaaaccaaaccttgtcgcaccaaatg
ttgtcgcctgagcagcagccacaacctcgtcaccaaaaactgagccgacaattatctcta
cagggagctaatgatcctagaacacatcgctcactacaacagcagttgtcatacgaccca
cgatattctagtcaacaaacataccagagacgaccgcaaccaattccagggagacaacaa
ggattttatgatctgcgtgggtcagaaaactttggcaatgtaagtgtaggagcagttgac
tctggaatgaggcatactatgcagaatattcaacaagacacaagagcgtgtaacgaaccg
tttttctctgggagtagtggtaggcatttgaatgttgagcatgccacacttgccaggatg
cagagcgcaccggaagtccctcaacttcgaagtgctgcagctgcaccaccgatcgcgaga
atggttcgtcaaaacagcaactcggacacacaattacatatcataggtggggaaatggaa
caaactgactataacttctctgaattccaaggcggaaggtctgattatcaacagggagac
gggttttcttctagttatgttccacgtggccccggttttgaagttcatcatcagcctgta
gcacatcagtttaatcgagggtttacccacggtgttccgagttatccacatagtcaagga
tacacacaaccacaaaaacaccatgctggaaacaccacgtggtcttttagcgaccaagga
tttgctcctggacaaataaaacaacctgcacaatttccagggtttcatcgacacgcaccg
atacaacattcacgttcgtatcaaatgatgcagtctcggccttcacaaccaaacgaatcg
tatacagagcgggatcctaatttccacacgggaatcctcacaaaacgggaggacgacatt
tggggaccatccgttgcttcaacttcgtcgtcatcggtgttttctcaaaattatgctcaa
ggagataatcgctatggtgacattccaagaagtcggtcagggatggcctctccagtttcc
gaacaaaaccggggtcatgttggccaatcaaatacgtcctcaaatagtcacactcggtcg
acggtcgagacacctagcgcgccttcaccactaattgctgaggatgctccaatacaccgc
aatgactcccgatatagtctatactaccacctgtgtggactgttcccggaacaaaaagtt
aggactgtcatgaacgaacacccagaccagactgatccacaggaactttgtgcttatata
attggagcaaaatga
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integrated database retrieval system
