Pecten maximus (king scallop): 117327916
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Entry
117327916 CDS
T07399
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03030
DNA replication
pmax03420
Nucleotide excision repair
pmax03430
Mismatch repair
pmax03440
Homologous recombination
pmax03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117327916
03420 Nucleotide excision repair
117327916
03430 Mismatch repair
117327916
03440 Homologous recombination
117327916
03460 Fanconi anemia pathway
117327916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmax03000
]
117327916
03032 DNA replication proteins [BR:
pmax03032
]
117327916
03400 DNA repair and recombination proteins [BR:
pmax03400
]
117327916
Transcription factors [BR:
pmax03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117327916
DNA replication proteins [BR:
pmax03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
117327916
DNA repair and recombination proteins [BR:
pmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
117327916
MMR (mismatch excision repair)
117327916
DSBR (double strand breaks repair)
HR (homologous recombination)
117327916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
OB_MEIOB_N
CompInhib_SCIN
IBR
Motif
Other DBs
NCBI-GeneID:
117327916
NCBI-ProteinID:
XP_033741050
LinkDB
All DBs
Position
5:36221057..36247126
Genome browser
AA seq
626 aa
AA seq
DB search
MTEQLTAGALESIIGGESVAHPVLQVLSSKRISAQGSTADRYRLLLSDGETSYSHAMLAT
QLNTLMESGDMDNLAVVKVNRYLCNTIQGDKRVMILLDVSVLAKGSDVGQRLGNPQQLKA
QPTADKNGHNSAQVPPLVPKQEPGGQSYMGVSQKQNTTKQSPPANPYKGNTNKGAGGNYS
MKGPSTPTTPGSNRVHTISSLTPYQNRWRIRARITQKGSVRTWSNSRGEGKLFSVNFTDE
SGEIRATGFNEAVDKFYDMLEMNKVYYVSRGTLKTANKQYSNVQNDYEMTFNQDTTIEPC
TEDVDLPGINFQFVALKELDSKDANSLVDVIGVVKSCNEVGTVTGRQSQKEITKRDLTLV
DQSGMSVNLTLWGNEAVNFNGDGHPVMAVKGARLSDFGGRSLSVLASSQVLMNPTDLKIA
FQLRSWFDSEGQSIDFQSFRGEGGSGSGSGTNWMTFADVKSQNIGGGEKADYFTSKGTLI
FLRKENCMYKACPTESCNKKLIDQGNGMFRCEKCSREFPNFKWRMILSANLADYSDNQWV
TCFQESAELLLGKNAQELGDMKDSDEAAFDQVFQDAMFKSYIFKLRAKMETYNDETRLKT
ICVNANPVNWKDYGHRLVEEINKLAL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacaactgacagcaggggctctagagtccatcattggaggagagtctgtcgcc
caccctgttttacaagttcttagttctaaacgaatatctgcccaaggctcaactgcggac
agatatagactcctgttgtctgatggagagacatcatattcacatgccatgttggcaaca
cagttgaacactttgatggaaagtggtgacatggacaacttagctgttgtgaaggtgaat
cgctacctgtgcaacacaatccagggagacaagagagtgatgatcctgttggacgtttct
gtcctggccaagggttcagatgtgggacagcgcctagggaatcctcaacagcttaaggct
caaccaactgcagacaagaatggccataactccgcgcaggtccctcctctggtgccgaag
caggagcctggtggtcagagttacatgggtgtgagccagaagcaaaataccaccaagcag
tcaccaccagcaaacccatataaagggaacactaacaaaggagctggaggaaactacagt
atgaaggggccttctacacccacaacaccaggcagtaatcgtgtacataccatctcctca
ctcacgccctaccagaacagatggagaatcagggcaagaataacgcagaaaggcagtgta
agaacatggagcaattctcgaggggaaggaaagctgttcagtgtcaattttacagatgag
tcgggagaaattcgtgcaacaggtttcaatgaggctgtagacaaattctacgacatgctg
gaaatgaataaggtctactatgtgagtcgaggaacactgaagactgccaataaacagtac
agtaatgtacagaatgactatgagatgacctttaatcaggacacgaccattgagccctgc
acagaagatgttgatttaccaggcattaacttccaatttgtagccctcaaagaacttgat
agtaaagatgccaattctcttgtagatgtgataggagtcgtaaaaagctgtaatgaagta
gggactgtgaccggacgacagagtcagaaggagattacgaaaagggacttaactctggtt
gaccaatctggcatgtcagtcaacctgacactatggggaaatgaggctgtgaattttaat
ggagatggtcaccctgttatggctgtaaagggagcacgtctgtcagattttggaggaagg
tctctgtctgtattagccagtagtcaggtgttaatgaaccccactgacctgaagattgct
ttccaattgagaagctggttcgactcggagggacaaagcattgacttccagagctttagg
ggtgaaggtggcagtggatcaggaagtggtactaattggatgacctttgctgatgtcaag
tctcaaaatatcgggggtggagagaaggcagactatttcacttctaaaggaaccttgatc
ttcctgcggaaggagaactgcatgtataaggcttgtccaacagaaagctgcaataagaaa
ctaattgaccaaggaaacggcatgttcaggtgtgaaaagtgttccagggaatttcccaat
ttcaagtggaggatgattttgtctgccaatctcgcagactactcggacaaccaatgggtg
acctgtttccaggagtctgctgagctattactggggaagaatgctcaggaacttggggac
atgaaggattctgatgaagctgcatttgatcaagtgttccaagatgccatgttcaagtcc
tacatttttaaattaagagcaaaaatggagacctacaatgatgagaccagattaaagaca
atatgtgtgaacgcgaaccctgtcaactggaaagattatggccaccgcttagtggaagaa
atcaacaaacttgcactgtga
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