Pecten maximus (king scallop): 117328264
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Entry
117328264 CDS
T07399
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117328264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmax03041
]
117328264
Spliceosome [BR:
pmax03041
]
Complex C
Other components
Step II factors
117328264
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_DCAF4
ANAPC4_WD40
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_NWD2_C
PQQ_2
Motif
Other DBs
NCBI-GeneID:
117328264
NCBI-ProteinID:
XP_033741628
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Position
5:complement(49280842..49303833)
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AA seq
571 aa
AA seq
DB search
MLALQDYASDSSGSDEETKQKIEDLTAHLKPIQSGKSLVSTQKLNAAPLVITKEDVGVQR
HLDVTTKEVKYNPKFEEMFAPQVGPSNPFKTQQMLATKNMISGYAESAHFNQFQFENQRR
TFTSYGYAIDPSVDVQVSTDPPVVGDRVAAEDSKGLTVFEAAPKRPEDKRKRLRNSDAGD
IEGYLGPWGKFVDEKTVMKPSEDEQKELDEILAKRSKTNKQTEEKTAEEKTTLHIKDAYD
YQGRSYLHIPQDVGVNLKSDEPPEKCFLPKKHIHTWTGHTKGLSAIRWFPVSAHLLLSCS
MDCKIKIWEVYNERRCIRTYAGHKQAVRDITFNNEGTEFLSCGYDRYCKLWDTETGECKS
RFTSRKVPYCVKFHPEPDKQHLFVAGTSDKKIVCWDIRSGEIVQEYDRHLGAVNTITFVD
QNRRFVSSSDDKSLRVWEWDIPVDFKYIADPSMHSMPAVTLSPNGKWLACQSMDNKVSIF
NVLNRFKYMRKKTFTGHMVAGYACNVDFSPDMSYIISGDADGKLYVWDWKTTKLYSKFKA
HDDVCISVLWHPHETSKVATAGWDGIIKYWD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctttgcaagactacgcgagtgattcatccggttctgatgaagaaacaaagcaa
aagattgaagatttgactgcacatttgaaaccaatacagagtggaaaatcacttgtatca
actcaaaagttgaacgcggctcctttagtaataacaaaggaagatgttggcgtgcaacgt
cacttggatgtcacaaccaaagaggtgaagtacaaccctaagtttgaggaaatgtttgca
cctcaggttgggccctctaacccatttaagacacaacagatgcttgctacaaaaaacatg
atttccggttatgcagagtcagcacatttcaaccaatttcaatttgaaaatcagcgtaga
acatttacaagttatggctatgctatagacccctctgtggatgtacaagtgtcaacagat
ccgccagttgtaggggacagggtcgctgctgaggatagtaaaggtcttactgtatttgag
gctgcacccaaacgccctgaagacaagaggaagcgtctgagaaactcagatgcaggagat
atagagggatatctgggaccttggggcaagtttgtggacgagaaaacagtgatgaagcca
agtgaggatgagcagaaggagctggatgagatactagccaagaggagtaaaacaaataag
cagacagaggagaagacggccgaggagaaaactacactacacattaaggatgcgtatgac
taccagggtcggtcctacctccacatcccacaggatgtgggcgtgaacctcaagtcagat
gaaccaccagagaaatgtttccttcccaaaaaacacatccacacctggacgggacacacc
aaaggattgtcagccattcgatggttccctgtgtctgcccacctacttctctcttgtagt
atggattgtaaaattaagatctgggaagtgtacaacgaacgacgatgtattcggacatat
gccggacataaacaagcggtccgagatatcacattcaacaatgagggcacagagtttcta
agctgtggctatgatagatactgtaaactttgggacacagaaacaggtgaatgtaagtcc
cgatttaccagcagaaaagtgccgtactgtgtgaagttccacccggagcctgataagcag
cacttgtttgtggcagggacctctgataaaaagattgtttgttgggatatccgctcaggc
gaaattgtccaagagtatgacagacatcttggtgctgtaaacaccatcacatttgttgac
cagaaccgacgctttgtcagctcgtccgatgacaagagtttaagagtctgggaatgggat
attccagtggatttcaaatatatagctgatccatctatgcactccatgccagcggtcact
ctgtccccgaacgggaagtggctggcctgtcagtccatggacaacaaagtctccatattt
aatgtgctcaacagattcaaatacatgaggaagaaaacatttacaggacatatggtggct
ggatatgcatgtaatgtagacttctcaccggatatgagttacatcatctcaggagacgca
gacggaaagttgtatgtctgggactggaagaccaccaaactttacagcaagttcaaggcc
cacgatgatgtgtgtatcagtgttctgtggcatccacacgaaacgtccaaggtggcaaca
gcaggctgggacggaatcataaagtattgggactga
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