Pecten maximus (king scallop): 117328795
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Entry
117328795 CDS
T07399
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117328795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117328795
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117328795
mRNA degradation factors
3'-5' decay
Pan complex
117328795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
Pkinase
zf-CCCH_4
zf-CCCH_9
zf-CCCH_2
Torus
Motif
Other DBs
NCBI-GeneID:
117328795
NCBI-ProteinID:
XP_033742233
LinkDB
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Position
6:4782508..4806528
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AA seq
864 aa
AA seq
DB search
MTSGVSGGKKPTLCRYFMNTGSCIYGDECQFFHQNPRSGVGFQKPFANGPSSSSQENQAG
PFDMMGNNGDQYFNATFEPENGGADFIPFPVRDRVYLIITHSRPISRTHRNMGNPMPPQG
MKPPFGPPPQGPPGHPGPPGPPGPPGPKMEGQMQRPDGSGHGMERPNQMMDGYGPRMNGP
VSMMDNPNPNGGPPRAGPRMDSMATDFAALNLSIPSSKGPNPIANEFIPKNGPLTHSASS
PNFSTFSDGMATDGSGNSHMMNNPAVNHMSQLGGPMGMPPPGGPMMPPHSGAQMSNTPPP
THLSTTGYTASPNHSPHLSPSNSPLMLRRTASPITPLKNTTPKKSANTTIQENVGGTTYF
YSPEDFTPQHEGAALPNFSVFPSLPPHIAHMTVKKNMPQFFMPDELRVEILNRHALTMAQ
IDTSANPDIPVEVDTYHNLFPLEPPPSNPMQKSNRFSYPTTCYKAVNTKDGLTYCLRRVH
GFRLSNTKCMSIIDMWKKMYHPNIVQLREVFTTKAFGDNSIVFVYDYYAGAETLMAHHFH
NSGAMNSYHGSMDGSSRSFNPSHGGGAGGGTGGKGNVNGPRQHAGLLPESLIWAYVVQLS
SALRAIHAAGLACRTMDPTKIIIYGKSRLRLNCVGILDVLTFDSTNGNPMAVMPHYQQDD
LLFMGRVVLALACNTVMAIQRDSFQNSMELIARNYSADLKNLFLYLLANQTRPRSINDIM
PMIGARFYTQLDSAQLRSDVIETELAKEVENGRVLRLISKFGIINERPEFNMDPQWSETG
DRYMLKLFRDYLFHQVDENGAPWIDMAHILQCLNKLDAGVPEKICLMSRDEHSVLVVSYA
ELKQNFEQSFNDLLSVRHQNGAYS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtggtgtttctggagggaagaaacccacactatgccgatattttatgaataca
ggttcatgcatttatggtgatgagtgtcaattttttcaccaaaatccaagatctggtgta
gggtttcaaaagccatttgcgaacggtccttcatcatcttcacaggaaaatcaagcagga
cctttcgatatgatgggaaataatggagatcagtattttaatgccacatttgaacctgaa
aatggtggagctgatttcatcccatttccagtaagagaccgagtgtacctaataataaca
cattcacgtcctatttcaagaacacacagaaacatgggcaatcctatgcctcctcaaggc
atgaaaccaccctttggccccccaccacaagggccccctggccacccaggacctccaggc
cctccaggacctccaggccctaagatggaaggccaaatgcagaggcctgatggttctggt
catggaatggagaggcccaatcaaatgatggatgggtatggtcctagaatgaatggacca
gtatctatgatggacaaccctaaccctaatgggggtccccctagggcaggcccaaggatg
gattccatggctaccgattttgctgcacttaatctgtcaattccaagttccaagggacca
aatccaattgcgaatgaattcattcctaagaatggacctctaactcatagtgctagttct
ccaaacttctcaacattttctgatggcatggctacggatggctctggaaacagtcacatg
atgaacaaccctgccgtgaatcacatgtcacagcttggtggaccgatgggtatgcctccc
cctggcggcccaatgatgcctcctcatagtggtgctcagatgtccaatacacctcccccc
acacatctgtccaccacagggtacacagccagtccgaaccatagcccgcatttatctccc
tccaactctccactgatgttacgtcgcacagcatcacccatcactccactgaaaaataca
acgcctaaaaagtcagcaaataccaccatacaggaaaatgtgggtggtacaacatacttc
tactctcctgaagattttaccccacagcatgaaggagctgctctgccaaacttttctgtg
tttccaagtctcccacctcatattgcccatatgacagtgaagaagaatatgccacaattc
ttcatgcctgatgaactgagagtggaaatcctgaatcgtcatgccttgacaatggcccag
attgatactagtgcaaatccagatatccctgtggaggtagatacctaccacaacctattt
ccactggagcctcctcccagcaatccaatgcagaagtccaataggtttagctaccccacc
acctgctacaaggctgtgaacaccaaggacggtctcacctactgcctgaggagagtacat
gggttccgattgtccaatactaaatgtatgagtatcatcgacatgtggaagaagatgtac
caccctaacattgtacaattgagggaagtcttcaccaccaaggccttcggagacaattct
atagtctttgtgtatgactactacgccggagcagagactttgatggctcaccacttccac
aattctggcgccatgaacagctatcacggtagcatggatggatcttcacgttcgttcaac
cctagtcatggaggaggcgcaggtggaggcacgggcggtaaaggaaatgtgaatggtcca
cggcagcatgctggtctgcttcctgagagcctcatctgggcttatgtggtgcagcttagc
tctgcactcagggcaatacatgccgctggcctagcctgcaggactatggacccaacaaag
atcattatctatggcaagtccaggttacggctcaactgtgttggtattctagatgttctc
accttcgacagcaccaatggcaatcccatggccgtgatgcctcattatcagcaagatgac
ttactgtttatggggcgtgtagtattggcactggcctgtaatacagtgatggccattcag
agagacagcttccaaaattccatggaactcatcgccagaaactactcagcagatctgaag
aatctcttcttgtatttactggccaatcagaccaggccaaggagcatcaatgatatcatg
ccgatgatcggggcaaggttctacactcagctcgactcagcccagctcaggagtgatgtg
atagagaccgagctggccaaggaggtagagaatggccgagtgctacgacttatctccaag
tttgggattatcaacgaacgaccagaattcaacatggatcctcagtggtcggaaacgggt
gataggtacatgttgaaactgttccgagattacctgttccatcaggtggatgagaatggg
gccccttggattgacatggctcacatcctacagtgcttaaacaagttggatgctggcgta
ccagagaagatctgtcttatgtctcgtgatgaacacagtgtgctagtggtttcatacgca
gaactcaaacagaattttgagcagtcgtttaatgatctcttgtcagtgcgtcaccagaat
ggggcatactcttag
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