Pecten maximus (king scallop): 117328972
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Entry
117328972 CDS
T07399
Name
(RefSeq) exosome complex component RRP45-like
KO
K03678
exosome complex component RRP45
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117328972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117328972
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117328972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117328972
NCBI-ProteinID:
XP_033742513
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Position
6:complement(11806506..11816455)
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AA seq
435 aa
AA seq
DB search
MRDTPLSNCEREFIRQAVVQKKRIDGRQPFDYRRIRIKFGTDRGSCYVELGQTRVFAQVS
CELCEPKPTRPSDGVLFINVELSPMACPSFEGRSHELGVEINRLLERCLKESRCVDMESL
CIISGEKVWQVRTDIHVLNHDGNIIDCASIAAITALTHFRRPDVTVEGSNVIVHPVEEKD
PIPLSVHHMPICVSFSFYEQGKFLLVDPTDKEEKVMDGKMIIGMNKHREICTLQVTGQML
LLKDQVLRCSNIAVVKVSETTDLIHRALDNDRQARAKGEKFGYTESVAMDNITTNEMEPE
EVDVDDVEESVAASLQTIREAMTISSSESSDVEILDKGVGCIGEGGPSTWELEEKELAEE
QGHKAIPMSKKSPQPEVVVLDSDSEEEDVVIMEGDQLHTQPRDAVDSTKKVSSVQSTNTT
RVQTKNKPKKRKGKP
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacacacctttatcgaattgtgagcgagaattcattagacaagcagttgtacaa
aagaagcggattgatggaagacagccatttgactacagaaggatcagaatcaagtttggt
actgataggggaagctgctatgttgaacttggccaaacaagggtgtttgctcaggtgtcc
tgtgagctgtgtgaaccaaagccaaccaggccctctgacggtgtcctcttcatcaatgtg
gagttatctcccatggcatgtccatcatttgaaggaaggtcacatgaattaggtgtggag
atcaacagacttctggagcgatgtctgaaggaatcacgttgtgtagacatggagtccctc
tgtatcatatcaggagaaaaggtgtggcaggtgagaacagacatccatgtgttaaatcat
gatggaaatattatagattgtgctagtatagctgccattacagcacttacccacttcagg
agacctgatgtgactgttgagggcagcaatgttatagtgcatccagtggaggagaaagac
ccaatcccccttagtgtacatcacatgcctatctgtgtgtccttctcattctacgaacag
ggaaagtttttgttggttgacccaacagacaaagaagagaaagtaatggatgggaagatg
ataataggaatgaataaacatcgtgaaatatgcacattgcaagttaccggacaaatgttg
cttctcaaagaccaggtcctacgctgttccaacatagcagtggtgaaggtgtcggagaca
acagatctcatccacagggcactagacaatgacagacaggccagggcgaagggtgaaaag
tttggatacactgagtctgttgccatggataacatcacaaccaatgagatggaaccagag
gaagtggatgtagatgatgtggaggaaagtgtggccgcttcacttcagacaatcagagaa
gcaatgaccattagctccagtgaatcatctgatgttgaaatattggataagggagttgga
tgtataggagaagggggaccaagtacttgggagctggaggagaaggaactcgcagaggaa
caaggtcacaaggccatcccaatgtccaagaaatcccctcaaccagaagtggtcgtgttg
gattctgacagtgaagaggaagatgttgttattatggagggtgaccagctacatacgcaa
ccaagggacgcagttgacagcacaaagaaagtttcttcagtacagtcaacaaatactaca
cgagtgcaaacaaaaaacaaaccaaagaaacggaaaggaaaaccttga
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