Pecten maximus (king scallop): 117329092
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Entry
117329092 CDS
T07399
Name
(RefSeq) vacuolar protein-sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117329092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmax04131
]
117329092
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmax04147
]
117329092
Membrane trafficking [BR:
pmax04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
117329092
Exosome [BR:
pmax04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117329092
Exosomal proteins of colorectal cancer cells
117329092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
DUF1351
Fib_alpha
WHD_Rad26_CSB
HEAT_EF3_GNC1
EcKL
Alpha-amylase
Motif
Other DBs
NCBI-GeneID:
117329092
NCBI-ProteinID:
XP_033742705
LinkDB
All DBs
Position
6:15748079..15764781
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AA seq
382 aa
AA seq
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MDRFEWGDDSFIPGERQVLQQRGVALYDGYDKTSFQDGILVLSTHKLIWKDIRDRSRILV
LHLSLVVFLEEQPSGFAKSAKIIVHLNPVPSQKSPGPVSHSVNHFIRLSFRDAGEREFNQ
AFSEQLEKRLWEQSIPTAVPAAQSGRHRAGIMGIERSLKQKQKDTDKDISKAFEDLSKLM
DKAKEMVNLSKTIATKIKERQGEISEDETVKFKSYLLSMGIPDPVTRETHGTGDKYYSEL
AKQLSKVLENQLQECGGIMTLTDVYCRVNRARGMELLSPEDMLHACEMLESLRLPVRMKV
FDSGVIVLQLQSHDEERVISDITDLVKEKTKLTADELAQLQGVSVILAKERLFLTEKVGG
ICRDETVEGLRFYSNYFLTRTD
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggacagatttgagtggggtgacgacagctttattcctggtgaaagacaagtattacag
caacgaggggtggctttgtatgatggatatgataagacttcttttcaagatggaattctg
gttttatcaacacataagctaatatggaaagatataagggacaggtcccgtattttggta
ttacacctttcacttgttgtatttctggaggaacaaccatcaggattcgctaaaagtgcc
aagattattgtccacctgaatcctgtgccaagtcaaaaatctcctgggcctgtttctcac
agtgtcaaccacttcatcagactctccttcagggatgctggcgaaagagagtttaatcaa
gctttttctgagcaacttgaaaagagactatgggaacaaagtataccaacagcagtccct
gcagcgcagagcgggcgacatcgggcaggaattatgggtattgaacgatcattgaagcaa
aagcaaaaggacactgacaaagatatctctaaagcttttgaagatctcagtaaacttatg
gataaggcaaaggaaatggttaacttatcaaaaacaatagcaacaaagataaaagaacgc
caaggtgaaatatcagaagatgagacagtgaagtttaagtcctatttactcagtatgggt
atacccgatcctgtgaccagagaaacacacggaactggtgacaaatactactcggagtta
gctaaacagttgtccaaggtcctagaaaatcaacttcaggaatgtggtggaatcatgaca
ttaacagatgtttactgccgtgtgaacagagctagaggaatggagttgctttcaccagag
gatatgttacatgcatgtgaaatgttggaatcactgcgactccctgttagaatgaaggtg
tttgatagtggagtgatagttctacagctacagtcacacgatgaggaacgagtgataagt
gatataacagatttggtgaaggagaaaacaaaactgactgctgacgagttggcccagcta
caaggagtttctgtgatattggccaaagaaaggctatttctgacagagaaagttggtgga
atttgtagagatgagacagtggaaggacttaggttttacagtaattactttctgacaaga
acagattaa
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