Pecten maximus (king scallop): 117329182
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Entry
117329182 CDS
T07399
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117329182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117329182
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117329182
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
117329182
NCBI-ProteinID:
XP_033742872
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Position
6:19886729..19901236
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AA seq
504 aa
AA seq
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MAAVEAPAAPVAAEDDEAWLYGEENKEAAQTNGEATEVTEETTEEKKEDREAGELSGEEE
SQEKDDDDDSDDDVQVTIGDIQTFPLNEAPRNLFKAQSGYQKPAGAAAASKTQTGTTTTV
KGVDLDTPGTINGVNQFEFDLDGLQADEKPWRKPGADITDYFNYGFNEDSWRMYCEKQRR
HRMDANPGTVTRIYVHQPASSMNRNEKKDVLHPPGTETPQTVPVIGSRGKTNPTPRKMAG
TIDVIGSTARDSRRPDASSMGDPIPVAGSRKTYNTSVPPPGISVHPTQGMPPMPDYSIPP
PGMALPPGMHPPPGPAPPGVPPGIPPPGFPPVEFDAYYPPTGQTSVSHYDDRNFSSHSTY
TSSYNQSNPWDNNRQEGGYRWGSDYSRERSPARSDSEYSSTRSERDYSYGRDRRRDRNRD
TYWRDRGDRDSYRERERSRSRERDRPRDHRHRDEKHRSRRKHRDDEDSDHHRSKHKKSKK
SKKDKDDDAYDPSNPSQDDIAKGE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggttgaggcaccggcggcgccagtcgcagctgaagatgacgaggcatggctt
tatggagaagaaaataaggaggcagcacagacaaatggcgaggctacagaggtaactgaa
gagaccacagaggagaagaaggaggacagagaagcaggagagctgagtggtgaagaggaa
tcacaagagaaggatgatgatgatgattctgatgatgatgttcaagtgacaattggtgac
atacagacatttccgctgaatgaagctccacgaaatttattcaaagcacaaagtggttac
caaaagccagctggagcagcagctgcatccaaaacccagactggaacaacaactaccgta
aagggtgtggacctagatactcccggaaccatcaatggtgtaaaccaatttgaatttgat
cttgatggacttcaagctgatgagaaaccctggaggaaaccaggtgcggatatcaccgat
tatttcaactatggcttcaatgaagactcctggcgtatgtactgtgaaaaacaaagacga
cacagaatggatgctaaccctggaacagtcaccagaatctatgtacatcagcctgcctca
tccatgaacagaaatgaaaagaaggatgtgctacatccgccaggtacagaaaccccccag
actgtgcctgtgattggttctcgtggcaagacgaacccaacaccaaggaagatggcaggc
acaattgatgttattggcagtacggccagagactctagacgaccagatgcatcctctatg
ggggatccaatacctgtggctggcagcagaaagacctacaacacatctgtgcctcccccg
ggtatatctgtacaccccacccaagggatgccgcctatgccagactattctataccccct
ccaggcatggcattgcccccgggtatgcacccacctccagggccagcacccccaggcgtt
ccaccaggtataccaccccctggatttcccccagtggaatttgatgcctactaccctccc
acaggacagacttctgttagtcattatgatgaccggaatttttcatctcactccacatat
acatcaagttacaatcagtccaatccctgggataacaatcgccaggaagggggatataga
tgggggagtgactatagcagagaacgcagtccagccagatctgactcagaatacagcagc
acacgcagtgaacgagattatagttatggtcgtgatcgcaggcgtgaccgaaacagagat
acctactggagagaccgaggagatcgggacagctacagagaacgggaaaggtccaggtca
cgtgaaagagatagacctagagaccatcgtcacagagatgaaaaacacagatcaagaagg
aagcacagagatgacgaagattctgatcatcaccgctctaaacacaagaaaagtaagaaa
tctaagaaggacaaggatgacgatgcttatgacccatctaaccctagccaggacgacatc
gcaaagggagagtaa
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