Pecten maximus (king scallop): 117329277
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Entry
117329277 CDS
T07399
Name
(RefSeq) caltractin
KO
K10840
centrin-2
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
117329277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117329277
03036 Chromosome and associated proteins [BR:
pmax03036
]
117329277
03400 DNA repair and recombination proteins [BR:
pmax03400
]
117329277
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
117329277
Chromosome and associated proteins [BR:
pmax03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117329277
Centrosome duplication proteins
Centriole replication proteins
117329277
DNA repair and recombination proteins [BR:
pmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
117329277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_9
AIF-1
EF-hand_5
EH
EF_EFCAB10_C
Dockerin_1
SurA_N_3
Sigma54_CBD
SRI
DUF7645
SUB1_ProdP9
DUF5580_M
TerB
DUF3008
Motif
Other DBs
NCBI-GeneID:
117329277
NCBI-ProteinID:
XP_033743031
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All DBs
Position
6:22954059..22958805
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AA seq
219 aa
AA seq
DB search
MRFTHPVYLITVCIFFCQSKCSVTGTPLLTSGHLQGGRFVSKINKTDMASYGGKKNALAG
RGMKKGGPKPELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMI
SDIDREGTGTIDFNEFLMLMTQKMSEKDVKEEILKAFRLFDDDDTGKISFKNLKRVAKEL
GESLTDEELQEMIDEADRDGDGEINETEFLKIMKKTSLY
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttacacatccggtctacctcattaccgtatgtatttttttctgccaatcaaaa
tgctctgtcacgggaaccccgctattaacatccgggcatttacaaggcggtcggttcgtc
tcgaagatcaacaaaacagacatggcaagttatggagggaagaagaatgctttggcagga
agaggaatgaaaaaaggtggtcccaaaccagagcttacagaagagcagaaacaggaaatt
cgagaggcgtttgatttgtttgacacagatggttctggtacaattgatgccaaagaactc
aaggtggcaatgagagcgttaggttttgagccaaaaaaggaagaaataaaaaaaatgata
tcagatatagacagagaaggaacaggtaccattgatttcaatgagtttttgatgttgatg
acacagaagatgagcgaaaaagatgtaaaagaagaaatcctaaaagcattcagattgttc
gatgatgatgatactggtaaaatctcattcaaaaatctcaagcgtgtagccaaagaacta
ggagagagtcttacagatgaggaattacaagaaatgattgatgaagcagatcgcgatggc
gatggtgaaatcaatgaaacagaattcctgaaaatcatgaagaaaacaagtttgtactag
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