Pecten maximus (king scallop): 117329414
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Entry
117329414 CDS
T07399
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-10-like
KO
K16498
protocadherin delta 1
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117329414
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmax01009
]
117329414
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmax04515
]
117329414
Protein phosphatases and associated proteins [BR:
pmax01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117329414
Cell adhesion molecules [BR:
pmax04515
]
Cadherins
Protocadherins
117329414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
117329414
NCBI-ProteinID:
XP_033743249
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Position
6:27113957..27159247
Genome browser
AA seq
1137 aa
AA seq
DB search
MILWVVLVSASIAVASGQEADFKYTLQEEKPNGTVVGNIASDVRPRINVTDTVFSKLRYQ
LLTEGNVFAKLFSLDEQSGSLTATKIDREKVCEDQETCDLRLSVAIFKDDPDHPNNPDLI
KLLLIDVIVQDMNDHPPVFSPPEVVVSISETVSIGYIIPIDEATDQDSGANNSVQTYEFV
TVQDVFRLKFPTDLNNIPTLEIEVNKRLNYELEKTYQLVIVAKDGGSPQKSGSVTIRINV
LDENDNSPEFTKSEYKAVTVENRGLGEVVVQVTARDLDSGDKGTVSYRFNPSSIPSVFGI
NDTSGDICCWKIDYEAEQSFSFFVQAVDGGVQPLTSSALVVITVTDVNDNAPQVNINLPP
GGEVISEAAEAGRYIANVAVSDPDSGAFRQCDLSVTQRLLQNGDPLYQHVQVLLKQRLDR
EVKAIHNVSVVCADGGSPNLVTTTSFIIHVGDVNDNPPIFTHSQYNVSIYENNQVGAPVT
IVTAMDKDDGENGRVRYSLSGNEDDFFSINEDSGVVSANVVFDRETHSKLEFQVVATDSN
VITKFSTTATVMVTVRDINDNQPSFSQESVHIYCTGEPGSSTVIGQLFAYDKDIGANGNI
HFPPTHPYTSIFEIIQSTGQIQTKVVLDRENQGMYDFHVTAEDNGQPALQTTTNVVIVVE
DVNDNVPNVTFPTSANNTVTITPSKSRGTIVTKVMASDPDQGVNSELSYVVMKGGSSLFH
VDNKTGVVSLGQDLTEGQIGTYAILLAVQDSGNPSQTTWSDLVIIVSNPDANKNVIIVIA
VISVTVTLSLGMIIMICLIRRQDSRTFDNGDGKLTDHKKKFVLDWLHCLSTSTRDVHKLG
TDRPDVQLNRPTDLKPICSNDSTASEGSQDCKNESKENIGRTDEDEGFVETPGGTLSHDS
GRGDSVRTRHDSSMSQQELMMSQDSRLFYSLPRYPTGSGDTVSDTRFSTATSEGVSIPES
WQNRPVPSRPVYNRNISLDEQMLRDRQKGQTLSSFREDARFSSTDSAIVPVSKNYKQSNP
IGLGLSYDSHTLHRHLPGQYPRSSNSASTKLAQKRTLSPISATPEPSEGGFSNSSSSYAP
HPRSPSHQPYSGVHFFKSGSQSSSQSQTGTSMNSLRQDSVQLEFDIENRLNREDCIV
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgattctgtgggttgtactagtgagtgcctccattgctgtggcctcaggtcaggaagcc
gacttcaaatacactttgcaagaggaaaaacctaacggaactgttgttggaaacattgct
tcggacgtgcggccaaggatcaatgtgacagacactgtgttcagtaagcttcggtatcag
ctgctcacagaaggtaacgtgtttgccaaactgttctcactcgacgaacagagtggtagt
ttgacagcgaccaagattgaccgtgagaaagtctgtgaggaccaggaaacgtgtgacctt
cgcctgtcagttgctatctttaaggatgaccccgaccacccaaataacccagatcttata
aaactactcctcatcgatgttattgtccaggatatgaacgatcacccaccggtcttctcc
cctccagaggtagttgtctctatctcggagaccgtcagtattgggtacatcataccgatt
gatgaggcgacagaccaggacagcggcgccaacaactccgtacaaacatatgagtttgtc
actgttcaagatgtgttccgcctgaaatttcctacagatctgaacaacatacctactcta
gaaatagaggtgaacaaacgcttgaattatgagttggaaaaaacgtaccagttagtaatt
gtagctaaagatggtgggtctccccagaagagtggtagtgtaactatacgtattaatgtg
ttggacgagaacgacaattcacctgagttcaccaagtctgagtataaggctgtgacagtg
gagaaccgtggcctgggagaggttgtcgtccaggtaacagccagggacttggactccggg
gacaaaggaactgtatcttacaggttcaacccaagctccatacctagtgtgtttggaata
aatgatacctctggagatatatgttgctggaagatagattacgaggccgagcagagtttt
tcttttttcgtacaagctgtggatggtggagtccaaccactaacttcctctgcattggtg
gtcatcactgtaacagatgttaatgacaacgcaccacaggtcaacatcaacctgccacct
ggtggtgaagtgatttctgaggctgcggaagcagggcgatacattgccaatgtggcagtg
tccgatccagacagtggggcatttcggcaatgtgacctgtcagttacacagcgattactt
caaaatggagaccctttatatcaacatgtacaagttctgctgaaacagaggttggacaga
gaggtcaaggccatacataatgtcagtgtggtctgtgctgatggaggctcacccaacctt
gtcaccaccaccagttttatcatccatgtcggcgacgtcaatgataaccctcccatcttc
acacactcacaatacaatgtatcaatatatgaaaataatcaggtgggtgcaccggtcacc
atagtaacggccatggataaggatgatggagagaatggtagagtaagatacagcctgtct
gggaatgaggatgactttttctccattaatgaagactctggagtggtcagtgctaacgtc
gtgtttgatagagagacacactcaaagctagagtttcaggtcgtggccacagacagtaac
gttataacaaagttcagcactacagccacagtgatggtaacggtccgggacatcaatgac
aaccagccgtctttttcacaggaaagtgtacacatttactgtacaggagaaccaggctcc
agcactgtgattggtcagttgtttgcctacgataaagacattggtgctaacggaaacatc
catttccctccgacacacccgtacaccagtatctttgagatcattcaaagcactggacag
atccagaccaaggttgtactggaccgggagaatcagggaatgtatgatttccatgtgact
gccgaggacaatggtcagcccgccctacagacgaccactaatgtggtgatagttgtcgag
gacgtcaacgacaacgtaccaaacgtaacgttccctaccagcgccaacaacaccgtcacc
ataacacccagtaagtctcggggcacgatcgttaccaaggtgatggcgtccgacccagac
cagggtgtaaactcagaactttcatacgtggtgatgaagggtggtagtagtctgtttcat
gtggacaacaagacaggtgtggttagtctgggacaggaccttacggagggacaaattggg
acctacgccatactgctggctgtccaggactccggcaacccaagtcagacaacctggtct
gatctcgtgatcattgtcagcaaccctgatgccaacaagaatgtgataattgtcatagct
gtgatatccgtcactgtgaccttgtctctgggtatgatcatcatgatctgtcttattcgg
cgccaagattccagaacgtttgacaatggggatggcaaattgactgatcataagaagaag
tttgtgttggactggctacattgtctgtccacctccacacgagatgtccacaaacttggt
actgataggccagatgtgcagctcaaccgccccactgatctgaagccaatatgttccaac
gacagcacagcatcagagggcagccaggactgcaagaatgagtccaaagagaatatcggg
cggacagacgaagatgaggggttcgtagagacaccaggtggtactttgtcacatgacagt
ggtcgtggtgacagtgtccgtacacgtcacgacagttctatgagccaacaggaactgatg
atgagtcaagattccagactgttttactcattgccacggtacccaacaggaagtggggat
acagtaagtgacacacgattctctacagccacatcagaaggtgtttctataccagagagc
tggcaaaatcgaccagtgccatctcgaccagtttacaacaggaacatcagtctggatgaa
caaatgttacgagatagacagaaaggtcaaacattgtcaagttttcgtgaagatgcaagg
ttttcttcaacagactcggccattgtgcctgtgagtaagaactataaacagagtaatcca
ataggattaggattatcgtacgatagtcatacattacacagacatttaccgggccagtat
cctcgatcttcaaacagcgcttctacaaaactggctcaaaagcgaacactttccccaatt
agtgcgacccctgagccaagtgagggtggtttctctaactcgtcatcttcttacgcaccc
caccctcgctctccctcccatcagccatattctggagttcatttcttcaagtctggttcc
cagtccagcagtcagtcacaaactggaacctcaatgaacagtttacgacaggactcagta
cagctagagtttgatatagagaatcgactcaacagagaggactgtatagtgtaa
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