Pecten maximus (king scallop): 117329440
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Entry
117329440 CDS
T07399
Name
(RefSeq) protocadherin gamma-B5-like
KO
K16498
protocadherin delta 1
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117329440
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmax01009
]
117329440
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmax04515
]
117329440
Protein phosphatases and associated proteins [BR:
pmax01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117329440
Cell adhesion molecules [BR:
pmax04515
]
Cadherins
Protocadherins
117329440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_pro
DUF807
Motif
Other DBs
NCBI-GeneID:
117329440
NCBI-ProteinID:
XP_033743271
LinkDB
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Position
6:28088892..28134322
Genome browser
AA seq
1154 aa
AA seq
DB search
MYSYLPLFLVTLAVQCKADIRFTVFEELPIGDEVGNIAITGKFNENRTTEEFNALEFSFL
ETNQYTSYFDLNMQTGILSVKKRIDRDAICSLVCHLSFDVAIRSSMSQDIFFPAVTVVVE
DTNDNVPVFAHTNWKLEIPENAAPNSVYDIIPATDNDTSLQFSIQRYTLSPITDLFTLNV
TKKLDGNFLVQLIVRQPLDRELQSFYQMYVTAQDGGENPNSGKMLVNISVTDMNDNPPIF
SESVYNVTVKEDTPPNTSVKQVVATDKDAGENGRVTYRIIPTTDTNIQDLFHINTTTGDL
YILTQLTYKPGESYTMIVEATDHGDTKKVTQARVNVYVEDSGNNPPVVRINILSGSGNVV
SIPESANVGAFVAHVSVEDSDQGDNGRVDCIVSSVFFKTESIPPGKGFKILLNQELDREN
EVNHSVTVTCHDFGSPVMNVSANFTVSVTDDNDNDPIFLKNPYTATIVENNQIGDKIVQV
SARDIDEGVNAQVHYFLHSDAGSNFAIQSESGVITATNSFNREQNVDFKFKVLAVDRGDP
PRTGTASVYVVVEDENDNKPVFNRTIFAFDVSENQDADSFVGKVGAVDLDKGDNSRITYF
ISTEDELLVPFIVFSNGDIKTNRVLDRESQSQYNFVVHARDHGEEPLSSTAYVTVYVMDT
NDNDPVIIYPNKTNHTIWSKSGTSLPLTTIQAYDIDEGSNKKLTYYIHEGNDDDMFLLHP
ESGELFLNRNYPIGKDKSVNLVICVKDSGNPVRAKCAQLTAVITVNNATNTGYQRESTSY
ITISIVVVIVTVLVSAAIILTIFFLKKIDRNRQKQKYGANGPLGVPVPNSYSASPASSQH
DVNSDAEFMERKKKEVTFSPSTSFKDINNKGMNMQYPIATDTKQGMYLYDSVPENGRKNT
EQTAQLNALHLQQLLFKTHQQEQTEPSAPQRVAHPSDSNSDTSGETIPSDSGRGGSEDEV
PSSNHTGDDSRSFDCGSYNSHIGTFHSPPNIPPRKQKLAPQVHGKASNNRPYPKSSTPTQ
IFLGPSRPYSLSTEHLNENNSNSNSGQRGQKNGPYVRSAPSHSSFTSPHTQSYLDSKSKS
SNFNTWNYLQPNNCVNYSNVSKDRDYFNLRPESISTCRSRDDDDDAATTTSGSYTINPEE
LEDDFYRPHQDMVV
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtatagttatctccccttgtttctggtgaccttggcagttcaatgtaaagccgatatc
cgtttcacagttttcgaggagctcccaatcggagatgaggtgggaaacatagccattaca
ggaaaattcaatgaaaaccgaacaacggaagaattcaatgctttggagttttcgtttttg
gaaacaaatcaatatacaagttatttcgacctgaacatgcaaactgggattttaagtgta
aagaaacgaattgatcgagatgccatctgttcactcgtatgccatctcagcttcgatgtg
gcgattcggtcaagtatgtcgcaggatattttctttcccgcggtaaccgttgttgtagaa
gataccaatgataatgtacccgtgtttgcgcatactaactggaaattggagattccagaa
aatgcagctccgaattctgtgtatgatatcataccagccactgataacgacactagtcta
cagttctctatccagcgatacactttgtctccaatcactgacctctttacattgaatgtg
acgaaaaaattagatggaaactttcttgttcagttaattgtcaggcagcctctggaccgt
gaacttcagtctttctaccagatgtatgttacggcgcaagatggtggggaaaacccgaac
agtggcaaaatgttggtgaatatttctgtaactgacatgaatgataatccgccgatattt
agtgagtctgtgtacaatgtgaccgtaaaggaagacaccccaccaaacacctctgttaaa
caggttgtcgccaccgacaaggatgcaggagaaaatggacgcgtcacctacaggataatt
cctacaacggacacaaacattcaggacttgtttcatatcaacactaccacaggagatcta
tatattctgactcagctcacatataaacctggcgaaagttacaccatgatcgtcgaggcc
acagatcacggggacaccaagaaagtgacgcaagccagagtgaacgtttatgtagaggat
tctgggaacaatccacctgtagtacgaatcaatatcctgtctggatctggtaatgttgtg
tcgattccagaatctgccaatgtgggtgcatttgtagcacatgtcagtgtggaagattct
gatcagggagacaatggacgtgtagattgtatagtttctagtgtattctttaaaacagaa
agtattccgcccggaaaaggctttaaaatcttactcaaccaggagcttgatagggagaat
gaagtgaatcacagcgtgacagttacatgccacgattttggttccccggtgatgaatgtg
tcggctaactttactgtgtctgttactgacgacaacgacaatgatccaatcttcctcaaa
aacccgtacactgctacaatagttgaaaataaccaaatcggagacaagattgtccaggtc
tcggcacgtgacattgatgaaggtgtcaacgcccaggtccactactttctccacagtgac
gcggggtcaaactttgcaatccagtcggagtcgggagtaatcacagccacaaactctttc
aatcgtgagcaaaatgtggatttcaagttcaaggtgttggccgtggaccgcggcgatcca
cctcgtacgggtacagcctctgtgtatgtcgtcgttgaggatgaaaacgacaacaaacct
gtgtttaacagaaccattttcgcttttgatgtttcggaaaaccaagatgcagattctttt
gtgggaaaagttggtgcagttgacttggacaagggagataattccaggataacatacttc
atctcaactgaggatgaattattggtaccttttattgttttttcgaatggagatataaaa
accaatcgagtgctagatcgggagtcacagagtcagtataactttgttgtacatgcccgg
gaccacggggaggagccccttagcagtacggcctacgttaccgtgtacgtgatggacacc
aatgataatgaccccgtcatcatttatcccaacaaaaccaatcatacgatttggtccaag
tctggcacctctctccctcttacaacaattcaggcctacgatattgatgaaggctccaac
aaaaagttaacttactatatacatgaggggaatgacgatgatatgtttctcctccacccg
gagtcgggggagctgtttctgaacaggaactatcctattggtaaagataagtctgtgaac
ttggtgatatgtgtcaaagattctggtaacccagtgagggctaaatgtgcccaactaacg
gcagtcattactgtcaacaatgccacaaacaccggttatcagcgagagtcgaccagttac
atcaccatatctattgtggttgtcatagtgacagttctcgtatctgcagctattattttg
acaattttctttttgaaaaaaattgatagaaatcgacaaaagcagaaatacggagctaac
ggccctcttggtgttcctgtgccaaacagttattcagcgtccccagcatcatcacagcat
gatgtcaactctgatgcagaattcatggaaaggaagaagaaagaggtgacattttcgcca
agtacaagttttaaagatatcaacaataaagggatgaatatgcaatatccaatcgccacg
gataccaaacagggaatgtacctctatgactccgtcccagaaaatggccgcaaaaacaca
gaacaaactgcacaactgaatgccctccatcttcaacagctattgtttaaaactcaccaa
caggaacagacggagccaagtgctccacaaagagttgcccaccctagtgacagtaatagt
gacacatcaggggagacaatccctagcgacagtgggaggggcggaagtgaggacgaggta
cccagcagtaaccataccggagatgactccagatcttttgattgtggatcttacaattcc
catatcggaacgttccattcccctccgaacattccacctcgtaaacagaagcttgctcca
caagtgcatggaaaagcttctaataacaggccatacccaaagtccagtactccgacacaa
atatttttgggtccgagtcggccctattctctgagtacagagcatctcaatgaaaacaat
tcaaattcgaattcagggcagaggggacagaaaaatggaccttatgtgcgatcagcgcca
agtcattctagttttacgtcacctcatacacagtcctacctggacagcaaatcaaagtcc
tcaaactttaatacatggaattacttacaaccaaataattgtgtgaattactcaaacgtg
tccaaagacagagactattttaaccttcgacccgaaagtatcagtacgtgtcggtcgcgg
gatgatgacgacgatgcagccacaactacatcaggaagttatacgattaatcccgaagag
cttgaggacgatttttatcgaccacaccaagatatggttgtgtag
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