KEGG   Pecten maximus (king scallop): 117329479
Entry
117329479         CDS       T07399                                 
Name
(RefSeq) replication factor C subunit 3-like
  KO
K10756  replication factor C subunit 3/5
Organism
pmax  Pecten maximus (king scallop)
Pathway
pmax03030  DNA replication
pmax03410  Base excision repair
pmax03420  Nucleotide excision repair
pmax03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pmax00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117329479
   03410 Base excision repair
    117329479
   03420 Nucleotide excision repair
    117329479
   03430 Mismatch repair
    117329479
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmax03032]
    117329479
   03036 Chromosome and associated proteins [BR:pmax03036]
    117329479
   03400 DNA repair and recombination proteins [BR:pmax03400]
    117329479
DNA replication proteins [BR:pmax03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    117329479
  DNA Replication Termination Factors
   ELG1-RFC complex
    117329479
Chromosome and associated proteins [BR:pmax03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    117329479
DNA repair and recombination proteins [BR:pmax03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     117329479
  Check point factors
   HRAD17(Rad24)-RFC complex
    117329479
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_11 AAA_22 ATPgrasp_ST AAA_16 Rep_fac_C AAA_30 ABC_tran DUF7740 AAA_5
Other DBs
NCBI-GeneID: 117329479
NCBI-ProteinID: XP_033743326
LinkDB
Position
6:complement(29097787..29103090)
AA seq 355 aa
MSLWVDKYRPNSLNKLDFHKEQAAHLKKLVNSGDFPHLIVYGPSGAGKKTRIMCLLRELY
GSGVEKLRIEQHNFTTPSNKKLDISTISSNYHIEVNPSDVGNNDRVVIQELIKTVAQTNQ
LESSSQKSFKVVILTEVDRLSVDAQHALRRTMEKYMATCRLILCCNSTSKVIPAIRSRCL
GVRVAAPSIEQISQILQSVCKKEGLTLPLELATKIAKKSNRNLRRALLMCEACRVQQYPF
RPDQEVTEPDWELYLKETANLIVQQQSPKRLLEVRARLYELITHCIPADVIMRGLLQELV
KNCDGELKLEVVQSAAYYEHRLQTGQKAIYHLEAFVAKFMAIYKRFFEEGIADLF
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgagtttatgggttgataaataccgtccaaattctctcaataaactagacttccacaag
gagcaggcagcccatttgaaaaagctggtaaacagtggggatttccctcacctgattgtg
tatggaccatcaggagcaggaaagaagacacggatcatgtgtcttctgcgtgagctgtac
ggatctggagtggaaaaattgcgcatagagcaacacaactttacaaccccttccaataaa
aagttggacatatccactatctccagtaactaccacatagaggtcaacccaagtgacgtg
ggaaataatgacagagtagtcattcaggagctcataaagacagttgcacagacaaaccag
cttgagtcatcatcacagaaaagctttaaagtggtcattttgaccgaggttgatcgtctc
agtgttgacgcccaacatgctctacgacggaccatggagaagtacatggccacctgtcga
ctgattctctgctgcaactccacttcgaaggtcattcctgctatccgcagtaggtgcctg
ggggtcagggtggcagccccttccatagaacagataagtcagatccttcagagtgtttgt
aagaaagaaggattgaccttgccattggaattagctaccaaaatagccaaaaagagcaac
agaaatctgcgccgtgccctgctgatgtgtgaggcatgcagagtccaacagtatccattc
cgacctgaccaagaggtgactgagcctgactgggagttgtaccttaaagagacagcaaat
cttatcgtccaacaacaatcgccaaaacggctactggaggtccgagcacgtctgtatgag
cttatcacacattgtataccggcagatgttatcatgaggggcctactacaggaactggtg
aagaattgtgatggggagctcaaattggaggtggtgcagtctgctgcatactatgaacat
cgtcttcagactggacaaaaggccatttaccatctagaggccttcgtggccaagtttatg
gctatttataaacgttttttcgaggaaggcattgcagatctgttctga

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