Pecten maximus (king scallop): 117329497
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Entry
117329497 CDS
T07399
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117329497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117329497
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117329497
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117329497
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
PI3K_P85_iSH2
ODAD1_CC
EspB_PPE
DUF948
PilJ
GapR_DNA-bd
Sec10_N
HEAT_ECM29
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
117329497
NCBI-ProteinID:
XP_033743353
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Position
1:28537501..28560732
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AA seq
746 aa
AA seq
DB search
MADRRKLQGEIDRCLKKVGEGVETFEDIWNKISLQVHNAANTNQKEKYEADLKREIKKLQ
RLRDQIKTWCASSDIKDKRILVENRKLIETQMERFKIVERETKTKAYSKEGLGAAAKMDP
IAKEKGEVVNWLSTTIESLQKQLEQFESRIEQLSSKKKKMDKDTQDQYDDLRAAQDRHKF
HIKKLETIMRMVDNDALPLDQIKKIKDDVEYYLEYNQEPDFEENEFLYDDLDLDDLGSQV
LASSPPNDDSILDKLSSTPTSTNSSSPSPSPSLSMNHSKDKYEEMDRKRHKSQNEDKQKA
TIIVTSSMSSPSSTNSSSSSSVTVNKVPTTPTKMFPGNSIANAESNHRPSSTPPLTAYNV
AAAGSQQNNSAGLSFPRLFNNSVWQRNLAAMKLSYLSDRFSRAETKNQAPLDHINSTISS
VPVTSNSTITNSVSSTGNPVLPAVPIPMISNSVMSTSPNTIVSNSATSSSLMTSFQPNSV
SVKPEMQVVMNGPLSAVGPLLKGVTENDIESMSSLKSIAQQAVLDAGLENRIPTTHTTTT
LDGRVHAPFNNSTSTSSQVAAPQPTSPSPSSSSDQSQQAQTTTIHLNPLLGVAPLGPVPL
TREHFYQLTMLEAAHHHFPHPSDSERIRHYLPRNPCPTPSYYPQLSPPHTDSVDYFQRLS
TESLFFIFYYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITEDFEQGTYIYF
DYEKWAQRKKEGFTFEYRYLEDRDLN
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggctgataggcgaaagctacaaggagaaatagacagatgtctaaagaaagtgggcgaa
ggtgttgaaacttttgaagacatctggaataagatatccttgcaggtgcataatgctgca
aacacaaatcaaaaagagaaatatgaagctgatcttaagcgtgagattaaaaagcttcaa
cggttgcgggaccagattaaaacatggtgtgccagcagtgacatcaaagataaacgaata
ctggtggaaaaccgaaagttgattgaaactcaaatggagaggttcaagattgttgaaaga
gagacaaaaacaaaagcctactcaaaggaaggcttaggggctgctgcaaaaatggatcct
attgcaaaagaaaagggagaagttgtaaattggctttcaacaacaattgagtccttacag
aaacagcttgagcaatttgaaagtcgaatagagcagctgtcatcgaaaaagaagaaaatg
gataaagatacacaagatcagtatgatgatttgcgagctgcacaagatcgacacaagttc
catataaagaagttagaaacaatcatgaggatggtggacaatgatgcactaccactagac
caaattaaaaagatcaaagatgatgtggaatactatcttgaatacaaccaagaaccagat
tttgaggagaacgaatttctttatgatgatttagatcttgatgatctaggttcacaagtg
ctggcatcttcaccgccaaatgatgatagcatattggataaattatcaagtacgccaaca
tcaacaaactccagttctccttcacctagtcctagtctttcgatgaatcattccaaggac
aagtatgaagagatggacaggaaaaggcacaaatcccaaaatgaagacaaacaaaaagca
acaataattgtaacatcgtccatgtcatcaccctcatcaacaaactcatcctcatcatca
agtgtaactgtcaacaaagtacctacaactcctacaaagatgtttccagggaattcaatt
gccaatgcagaaagcaatcatcgtccaagttcaacaccgccattgacagcatacaatgtt
gcagcagcagggtcccagcaaaacaatagtgcaggtctatctttcccacgacttttcaac
aattctgtgtggcagcgcaatttagctgccatgaagctatcatacttgtctgatcgtttt
agtcgagctgaaacaaagaatcaagccccacttgaccatattaattctacaataagtagt
gtgccagtgacatcaaactcaacaataacaaactctgtctcttcaactggaaatcccgtc
ttaccagctgtaccgatccctatgatatcaaacagtgttatgtcaacttctcctaacacg
attgtgtcaaatagtgcaacaagtagttccttaatgacttcttttcaacccaactcggtg
tctgtcaaacctgagatgcaagttgtaatgaatggaccgcttagtgctgttggaccatta
ctaaaaggtgttacagagaatgatattgagtctatgtcatcattaaagtcaatagcgcaa
caggctgtgttagatgcaggtctagaaaacaggattccaacaacgcacacaacaacaaca
ttagatggaagagtacatgcaccattcaacaattcaacatctacgtcatcccaggtggca
gcacctcagcccacctccccatcaccatcatcgtcttcagaccagtcacagcaagcacag
accacgacaatacacctcaatcctctattgggtgtggcgcccttaggccctgtgccactc
actagggaacacttctaccaactaacgatgttagaagcagcacatcaccactttccacac
ccgtcggactccgaaagaatcaggcattacttaccacgtaatccatgcccgactccttca
tactacccacaactctctccaccccatacggactcggtggactattttcaacgattatca
acagaatcattattctttattttctactacatggagggtacaaaggctcaatatctggca
gcaaaagctcttaaaaagcagtcgtggcggtttcatacaaagtatatgatgtggtttcag
cgacacgaagaaccaaagacaattacagaagactttgaacagggcacatatatctacttc
gattatgagaaatgggcccagagaaaaaaagaagggtttacctttgaataccggtatttg
gaggatcgagatttgaactaa
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