Pecten maximus (king scallop): 117329854
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Entry
117329854 CDS
T07399
Name
(RefSeq) CCR4-NOT transcription complex subunit 7-like isoform X1
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117329854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117329854
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117329854
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117329854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DUF6786
Motif
Other DBs
NCBI-GeneID:
117329854
NCBI-ProteinID:
XP_033743921
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All DBs
Position
6:complement(43588360..43603639)
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AA seq
300 aa
AA seq
DB search
MPSIAQTEYGIKDVWQNNLEEEFRKIRHVVTKYRYVAMDTEFPGVVARPIGEFRSTADYS
YQLLRCNVDLLKIIQVGVTFQNELGETPEPVSTWQFNFKYNLTEDMYAQESIDLLQNSGI
QFEKHINDGIDVNDFAELLMTSGIVLNEEIKWLSFHSGYDFGYLLKMLTDSKLPREESDF
FEMLRIYFPNIYDVKYLMKSCKNLKGGLQEVAEQLEIERIGPQHQAGSDSLLTGAAFFKM
REMFFEDNIDDVKYCGHLYGLGTSYVQNGAGYDSISLLHQNHTSVAATGSEETNSTTTNS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaatagcacaaacagagtatggtatcaaggatgtgtggcaaaacaatctagaa
gaagagttcagaaaaatcagacatgtcgtcaccaaatacagatatgtcgcaatggacacc
gagtttccaggtgtggttgctcgacctattggagagttccggagcactgcagattactcc
taccagttactccgctgtaacgtggatctgctaaagatcattcaagttggagtcacattt
caaaacgaattgggtgaaactccagaaccagtatcgacatggcagttcaacttcaaatat
aatctgacagaggacatgtatgcccaggaatccatagatctgctacagaactcgggaatc
caatttgaaaagcacataaatgacggaatcgatgtcaacgactttgcagagcttttaatg
acgtctggaattgttttgaatgaggaaattaaatggttatctttccacagtgggtatgac
ttcggttatctgctgaagatgttgacagactcaaagttgccaagggaagagtcggacttt
ttcgagatgctacgtatatacttcccaaatatttacgacgtcaaatatctgatgaagagc
tgtaaaaatctcaagggaggtctccaggaggttgctgaacagctagagattgaaaggata
ggaccgcagcaccaagctggaagtgatagtttattaacgggagcagctttcttcaaaatg
agagagatgttctttgaagataacatagacgatgtaaagtattgtggccatctgtatgga
cttgggacctcgtatgtacagaatggtgctggctatgatagcattagtttgctccatcaa
aatcatactagtgtggcagcaacagggtcagaagaaactaactccacgacgacgaactca
tag
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