Pecten maximus (king scallop): 117329887
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Entry
117329887 CDS
T07399
Name
(RefSeq) nuclear pore complex protein Nup54-like isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117329887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117329887
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117329887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
117329887
NCBI-ProteinID:
XP_033743989
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All DBs
Position
6:45766115..45800408
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AA seq
585 aa
AA seq
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MAFQLNTGGFGSGNTAAPSFGTTATAQPFGFGTTTTSTAAPTLGFGGTATSGTPSFGGFG
TTTTAAATFGSTTAPTFGFGGTTTTSAPTFGFGGALGTATTSAPGFGGFGTPTTSAGGLT
LGGSTGFGTGTATGFGTGTATTGFGGFGGASTFGSGTSGFNLTGAGTTGAGLLGGGTSTS
TGLFGVNQQQQQQQQQNLQSLDNLGTAITTPQLYGDERDAIIAKWNQLQAYWGTGKGYFS
QNGCVTFTPENPYCKFKAIGYICLPKSRNEDGLVAITIKKKESEVSAGQQLIVDSLFKML
GSKPQYSVCVEGIRPLPDNKTELVIYILERPDRGPARRISALDTANFLKQNNILPQLQSQ
IIAEDVRPKTGFTKDQHKQYLDNTPSGIHPLIWQQAKLDNPDPEALIPVPMVRFKELFHR
MKHQEQQTKLHHQRMDMIATDLTQLQQKQVSMLAKLDEYKRKHLELGHRLLQVVVKQEIF
RKMGYAIQAEEEQLRVQLEKSQAELNHPTQFKGRLNELMSQIRMQNHLASTRTDISYQID
PTLQDEIKQLLKQQQEGLRHLIQIIKQDGQDLQLIEQNLDAPSRR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcttttcaattaaatactggtggatttggatccgggaacacagcagctccttcgttt
gggacaaccgcaacagctcagccatttgggtttggtacgaccacaacttctacagccgcc
ccaacactggggttcggcggtacagccacttcagggaccccgtcgttcggaggtttcggc
acaacaacaacggctgctgcaacgttcggaagcacaacggccccaacgtttggatttggg
ggaaccactacaacgtctgctccaacatttggtttcggaggggcactcggaacagcaaca
acatcggcgcctggctttggtggatttggaacaccaacgacgtctgcgggaggtctcaca
ctaggcggcagcactggctttggaacagggacagcaacaggatttggtaccggcacagcc
actacaggttttggaggatttggtggggcgtcaacatttggaagtggtacgtctgggttt
aatcttactggagctggcacgactggggcaggtcttttgggcggaggaacatctacaagc
actggtttgtttggtgttaatcagcagcagcaacaacagcagcaacaaaatctccaaagt
ctggataaccttggtaccgccatcaccacaccacagctgtacggagatgaacgagatgcc
atcatagctaagtggaaccagctccaggcatactggggcactggcaaaggctatttcagc
cagaatggctgtgtgaccttcaccccagaaaatccttactgtaaatttaaggccataggg
tacatttgtctaccaaagtctcgtaatgaagacggacttgtggccattaccatcaagaag
aaggagtcggaagtatctgctggacagcagctgattgtcgactccctgttcaagatgtta
ggtagcaagcctcagtattctgtttgtgtggagggcatcaggccactgccagataacaag
acagagctggtgatatatattctggaacgacctgaccgaggaccagctcggagaatttca
gctctggatacggctaacttccttaaacagaacaacatactaccacagctgcagtcacag
atcattgccgaagatgtccgaccaaagactgggttcaccaaggatcaacacaaacaatac
ttggacaacaccccttcaggaatccatccccttatttggcagcaggccaagttagacaat
cctgatcccgaggcactcattcctgtccccatggtccggtttaaggagctcttccatcgc
atgaaacaccaggaacaacagacaaagttacaccatcaaaggatggatatgatagccacg
gacttgacacagctgcagcaaaaacaggtcagcatgctagcaaaactggatgagtacaaa
cgtaaacacctggagcttggccacagacttctacaggtggtggtgaaacaggagatcttc
aggaagatgggttatgcaattcaggcagaagaggaacagttacgtgtccaactggagaaa
agtcaggctgaacttaaccatcccacacagtttaagggtcgtttaaatgagttaatgtca
cagattagaatgcagaatcatttggcatctacgaggacagatattagttatcaaatagac
ccaactctacaggatgaaataaaacagttattaaagcagcaacaagaagggctgcgtcac
ctcatacagattattaaacaggatggacaagatttacaattgatagagcaaaacctggat
gcccctagcaggcgatga
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