Pecten maximus (king scallop): 117330309
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Entry
117330309 CDS
T07399
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117330309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmax03021
]
117330309
Enzymes [BR:
pmax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117330309
Transcription machinery [BR:
pmax03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
117330309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Chorismate_synt
Motif
Other DBs
NCBI-GeneID:
117330309
NCBI-ProteinID:
XP_033744394
LinkDB
All DBs
Position
1:31208290..31243888
Genome browser
AA seq
1385 aa
AA seq
DB search
MVKEQFXEADVAKKISHVTFGLLNSHQMQQMSHLHVVSKTLYNQDGSRKPVPNGVLDHKM
GTSEKDNNCDTCGKGLADCTGHFGYIDLELPCFHIGYFRAIINVLQMTCKECSGILLRSE
DKTHFLESIKRPLTYLQCKAMKKKIYEKCRKVSICPSCGAYNGMVKKCGLLKIIHDKYKT
GHKGNEIIRSDFLSSFQDAVEHDKEIEPLLNKTQVILNPVMVLKLFQRISDEDMPLLMMN
SDIARPEDLILTRVLVPPICIRPSVLSDLKSGTNEDDITMKLTEILFLNDVIQKHKATGA
KMYMIMEDWDYLQLQVALLYNSETSGIPIHMQPKKSTRGFVQRLKGKQGRFRGNLSGKRV
DFSGRTVISPDPNMRIDQVAVPVHVAKVLTYPERVNKANIKMLRKLVKNGCDIHPGANFI
QQRNHIKRFLKYGNREKVAKELKYGDIVERHLIDGDVVLFNRQPSLHKLSIQAFYAKVMP
HRTFRFNECCCNPFNADFDGDEMNLHLPQTEEAKAEAITLMGSKANIITPRNGEPLIAAI
QDFITGAYLITQKDVFFDRARTCQLISAMLSGTDSDMKIDLPPPCIIKPCKLWTGKQIFG
VLLRPNKNCPVKANLRTRGKNYSTGEDLCYNDSFVVIRNSELMCGSMDKGTLGSGSKNNI
FYVILRDYGEQYAAYALVRLARLCPAFLSNRGFSIGIGDVTPGVGLVKAKNLLLEDGYSK
CESYIRDLDEGRLQTQPGCSEEETLEACILKELSVIRDHAGKACLRELHKSNSPLTMAIC
GSKGSFINISQMISCVGQQAISGKRTPNGFEDRALPHFEKHAKDPAARGFVENSFYTGLT
PTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSHYDLTVRSSTGDIVQFLYG
GDSLDPACMEGKDTPIDFKRVFDHVRANTRRSSQGEKALNGKTIVQLVEQKLATNMFQTC
SAEFKNDLKKWLKSINKSRQKYGILDEQEQRLPPVLLEVERVTETQLDHFLSCCKHKFMR
AQIEPGTAVGAVCAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINASKIISTPI
ITAQLEVENDAEFARVVKGRIEKTTLGEVSEYMEEVFLPDDCFILIKLDLERIRLLKLEV
HADSIKFAICSSKLKVKPQHIQIHSEAVITVKPNETSKSSMYYVLQTLKKELPGVMIKGI
PSVTRAVIHIDEGEGDKYKLLVEGDNLRAVIATPGVKGTHVSSNNTLEVEKTLGIEAART
TIMNEINYTMSSHGMSIDIRHVMLLADLMTFKGEVLGITRFGLAKMKESVLMLASFEKTA
DHLFEAAYHGQKDTINGVSECIIMGIPMGIGTGLFKLLHKAEKNVKPRRRPLVFDRTEFH
LPVVS
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaacaattcngagaggccgatgtggccaagaaaataagccatgttaccttc
gggttgttgaattcccaccaaatgcagcagatgtctcatttacatgtagtcagtaaaacc
ctttacaatcaagatggtagtcgaaaacctgtgccaaatggtgtactggaccataagatg
ggaacaagtgagaaagacaacaactgtgacacatgtggaaagggactggcagattgtaca
ggacattttggatacattgaccttgagctaccttgcttccatataggatacttccgagca
attatcaatgttctacaaatgacatgcaaggaatgcagtggaattctgctccgttccgag
gacaagacacattttttagagagcatcaagcgaccactcacctacctccaatgcaaagca
atgaagaaaaagatctacgaaaagtgtaggaaggtgtccatttgtccatcttgtggagca
tacaatggtatggtgaagaagtgtggtttactgaaaatcatccatgataagtataaaact
ggccacaagggtaatgaaatcatccgttcagacttcctgtcatcctttcaagatgcagtg
gagcatgacaaggagatagagcccctcctgaataaaacacaggttatactcaatcctgtc
atggtgctgaagctgttccagagaatttctgatgaggacatgccgctgttgatgatgaac
tcagatattgctcgacctgaagacctcatcctaacaagagttttagtgccacccatttgt
attcggccatctgtactgtcagaccttaaatctggaactaatgaagatgatatcacaatg
aaactgactgagatattgttccttaatgatgtcattcagaaacacaaggctacaggagca
aagatgtatatgattatggaagactgggactacctacaactacaggtggcattgttatac
aacagtgagacatcaggcatacctatacatatgcagcctaagaaatctacaaggggtttt
gtacaaagactgaaagggaaacagggtcgtttccgtggtaatctgtcgggcaaacgagtt
gacttctccggcagaactgtgatttcccccgatcccaacatgagaatagatcaggttgct
gtaccagtacatgtcgcaaaagtgttgacgtacccagagcgtgtcaacaaagccaatata
aagatgctgcgtaaactggtaaagaatggatgtgacatccatccgggggctaactttata
cagcagaggaaccacatcaaaagatttttaaaatacggaaatcgagaaaaagttgcaaag
gagctcaagtatggtgacattgtagaacgacatctgatagatggtgatgttgtactgttt
aatcgacagccttcactccacaagctcagtatacaggctttttatgcaaaagttatgccc
catcggacatttcgcttcaatgagtgctgttgcaaccctttcaatgcagattttgatggt
gatgaaatgaatcttcatctgccgcagacagaggaagccaaggccgaggcaatcactttg
atggggtctaaagctaacatcataacaccgagaaacggagaaccgctgatagctgctata
caggattttatcacaggtgcctacctcattacccagaaagatgtgttctttgatcgggct
cgaacctgtcagttgatttcagccatgttgtcagggacagacagtgacatgaagatagat
ttacctcctccatgtatcataaagccctgcaagttgtggactggcaaacagatatttggc
gtactgttacgaccaaataagaattgtccagtgaaggccaatcttcgtactcgtgggaaa
aactactcaacaggggaggatctctgctataatgactcttttgttgtcatacgtaacagt
gaactaatgtgtgggtcaatggacaaaggaacgttggggtctggctccaaaaataatatc
ttctatgtgattctgagggactatggtgaacagtatgctgcctatgccttggttcgcctg
gccagactctgtccagctttcctcagtaaccgagggttttccattggtatcggggatgta
acaccaggtgttggactggtcaaggccaagaacctacttctggaggatggatattcaaag
tgtgagagttacatccgtgacttggatgaaggacgactacagacacagcctggatgtagt
gaagaagaaacactggaggcctgtatcctaaaagaactgtctgtaatccgtgaccatgct
ggaaaagcttgtcttcgagagctacacaagagtaacagccccctgactatggccatctgt
ggttctaagggatcattcatcaacatttctcagatgatatcctgtgtgggacagcaggcc
ataagtggtaagaggacacccaatggcttcgaggatcgtgctctacctcactttgaaaag
catgctaaggatccagcagcacgaggtttcgttgagaacagtttctacactggtctgaca
ccaacagagtttttcttccataccatggcaggccgagaaggtttggttgacacagcagtc
aagacagcagagactggctacatgcagcgacgactggtgaaatcacttgaagacctgtgt
tcccactatgatctgacagtaaggagttctacgggagatatcgtccagttcctgtacgga
ggtgacagcctcgacccagcttgcatggagggcaaggatacacccatagacttcaaacgt
gtgtttgaccatgtcagggcaaacaccagaagaagtagtcaaggagaaaaagcactcaat
ggtaaaaccattgtccaactggttgaacagaaattagctaccaacatgttccagacctgt
agtgcagaatttaagaatgaccttaaaaaatggctgaaaagtatcaacaaatctagacaa
aagtatggtattcttgatgagcaggagcagcgacttccaccagtgctccttgaggtggag
agagtgactgaaacccaacttgaccatttcctgtcctgctgtaagcacaaatttatgcgg
gcccaaatagaaccagggacagctgttggagctgtgtgtgcacagagtattggggagcca
ggcacacagatgaccttgaagacatttcactttgctggtgttgcttccatgaacatcaca
cagggtgtgcctaggattaaagaaatcatcaacgcctcaaaaatcattagtacacccatc
atcacagcccagttggaagtggaaaatgatgcagaatttgcacgagtcgtcaagggtcgc
attgaaaagacaactttaggagaggtgtctgaatatatggaggaagtgttcttgccagat
gactgcttcatattgatcaagcttgacttggaaagaatacgcctgctcaagctggaagtc
catgcagacagtatcaaatttgccatatgcagctccaagctcaaggtgaaaccacagcac
atccagatccacagtgaagctgtcattacagtgaagccaaacgaaacttccaagagctca
atgtactacgttctgcagacactgaagaaggagctgccaggtgtaatgatcaagggtata
ccatccgtgactagagctgtgatacacatagacgagggtgagggagacaagtacaaacta
ctggtagagggggacaatctgagagcagtcatagccacaccaggggtaaagggtacccac
gtgtcgtccaacaacacactggaagtagaaaagacattgggtattgaggctgctcgtacc
accatcatgaacgagatcaactacacaatgtcaagtcacggaatgagtattgacatccgc
catgtgatgcttctagctgaccttatgacctttaagggagaagttttggggattacccga
tttggattggccaaaatgaaggagagtgtcctcatgctggcttcgtttgagaagacagca
gaccatttatttgaagctgcctatcatggacagaaagacacaatcaatggtgtgagtgaa
tgcatcatcatgggcatcccgatgggaatcggcaccggactattcaagctactacacaaa
gcagagaagaacgtgaagccgcgacgacgcccacttgtctttgacaggacagagtttcac
cttccagtagtatcctga
DBGET
integrated database retrieval system
