Pecten maximus (king scallop): 117330460
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Entry
117330460 CDS
T07399
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117330460
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
117330460
3'-5' decay
Other 3'-5' decay factors
117330460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
ResIII
PhoH
TPR_19
AAA_22
AAA_19
zf-CCCH
UvrD-helicase
AAA_16
PAM2
zf-C2H2_jaz
Helicase_RecD
HEAT_Nup120
SRP54
Bac_DnaA
AAA_7
AAA_5
DUF4187
T2SSE
AAA
Motif
Other DBs
NCBI-GeneID:
117330460
NCBI-ProteinID:
XP_033744648
LinkDB
All DBs
Position
1:complement(31697143..31741908)
Genome browser
AA seq
1695 aa
AA seq
DB search
MDKGAQKDDHMSREASASPLTDLQDYLTRITSLLKQRNFHEALDICDTALSVYKNEEKLQ
EKKIKILCHQGRFEEAYNIARKWSIRDPKNLTAQKELKRLKIVIHALNDQDEDSEEEESE
CKIKEVDETKVETEDDDKRSSPEGMETRHSHNSVTQTVPVTHPTITSQTYSPQTVEQENR
KHVCTFCNISFDQQEELDTHCKSDLHRKKITADDDQNWKYREPPRGLNAEEYSLCKSTEE
IGKCAFGDKCTEAHSKEELNEWKMRFKFRKQLIKVAHDKQLHGNTYAEQLMEKLVTSENP
KSLMVSGVEYSKVHVNSDLKVNMTSKKCTSAWTFTITSKRSLHIVALLDDTYRTYFHIAS
ISVGPKKTQKYQNLETLCQEWENPEYPNIPLGEYVYRIKVVFKTDIYGTFRQTLVMDFGT
DPVLRRELQVESAPITDTEKVFNDFLQGNQGRWRKNNVHLLPFEPKPIPNTAIEDKLLSK
YSLPDIEKFRFEDHLMHPPTKETYRIWMHEMLYVEEWSQLESISRYSLNTSLQLVNRFLL
VPGMISGAKYAQDGELFARMALEDRLSEDYAGGRLILNSTLAWLTPQDQNKKDLSSNQPR
VYEAVIEDKGKNFIFLRLSKECVEELDLSCDQEFPVQIQFQLNRLPKCEMHAAIDRLPTL
DLVFPPKNTFPTTSWVQGSPELSEVVSTKLNEKQREAILKITSEGNLSLPPILLVGPYGT
GKTYTLAQAAKQILQQDDTRILICTHSNSAADLYIKEFLHPLVKEGYLEARPLRLYFRHR
WIQTVPEVVIQYCIRATAGSSAIFRCPVFEDVEKHRIVITTLGTARYLCDLDLEPGFFTH
IFLDEAAQAMESDSLIPLSLCGPYTRVVLAGDHMQLSPEIYSDLGRQQGFQKSMLERLHE
LYPDDVPCKVMLCENYRSHSAIIDFTSDLFYDSQLTASSEQPCHPLYYPLTFYSARGEEV
QHENSIGFYNIAEVHEVIDRVDHLVRTWPSSEWGELGEGSIGVLTPYTDQVFHIRSELRK
RKMYNIKVERVFNVQGKQFRVVILSTVRTRHSCSADTIQEDVVNYGFLSDIKLLNTAITR
AQSLVMVIGDPVSLCLVGKSRKIWEYYLEICQDNNSLFGTTWTQLKAQLTSADMRKTFIL
NPLAPEFVPNRLFHAIAPDIAQQGASGSPTSYHGAAQHPQYYMGPRVTYPGQQLAHQQMF
PHPYMPVPYPGLIPHVVYNRQGVPHILGSPAQGRAPVRGYHPRHASPLAIPKVRPGDKDK
VKVDPSQPDVIIPGKKLPSMTQRGRQIMYMPQRMSAACQQMYFYPQHYGGYFYMPEDPRV
LINQQLPRGPVLHPLGPQHPSQFYPILRPHYAPVGLDDAEDKRSSQTSSPVSSQGRSGSP
ATSPGSSVASQQIQLLPNVRHVPIHLFPRTATPTNSSRPSTPQRTESPQVSQDMGTTIDP
KASQKIEAGYLKSSSPALEHQERRGSANSPLARVIASAQRQVPTTADSGLVLSTPYSSGF
GDMIMPGQNGDMNDVVKKEKTKRTPVGLRLETGFSRQFSEDLETPTEITDLVKMIDETIE
EGHESAEEEEQWNRQSKSESSTFFSSRTTKTMAATRKLHLNIPQQSSTETSESSGSPPSS
PPGSDQKPTYAGMLRRRLPAATNDIDPNLLEPQTPHTPAGFISPGTDIDTDPLGILRNLN
INASTEKQRTYKYFS
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atggataagggggcacaaaaagatgaccatatgtccagagaggcgagtgcatcaccatta
acagatctccaggattatctgacacggattacctcccttctgaaacagagaaactttcat
gaagctttagatatatgcgacactgccctaagtgtatataaaaatgaagaaaaactacaa
gaaaagaaaatcaaaatcctgtgtcaccaaggaagatttgaagaagcttacaatattgca
aggaagtggtcaatacgagatccaaagaatttgacagcacagaaggaactgaagaggctg
aagattgttatacatgcgttaaatgatcaggatgaggacagtgaagaggaggagtcagaa
tgcaagataaaggaggttgatgaaactaaagtggaaacagaagatgacgacaagaggtca
tctcctgagggcatggaaactagacacagccataactctgtcacacagactgtaccagtt
acccatccaaccatcacctcacaaacatacagcccacaaactgtggagcaagaaaacagg
aagcatgtctgcaccttctgtaatatcagttttgaccaacaagaagaattggacacacac
tgtaagagtgacttacacagaaaaaagatcactgctgatgatgaccagaactggaagtac
agagagccaccacggggtcttaatgctgaggaatattctctgtgtaagagcactgaggaa
attgggaaatgtgcctttggtgacaagtgtacagaagctcactctaaggaagaacttaac
gagtggaagatgcgttttaaatttcgaaaacagcttatcaaagtggcacatgataaacaa
ctacatggcaacacttatgctgaacaactgatggagaaacttgttacttcagagaatcct
aaatctcttatggtctctggtgtggagtactctaaagtacatgtgaactctgacctcaaa
gttaatatgacctcaaagaaatgtacaagtgcctggacttttaccataactagcaagaga
agtcttcacattgtggctttacttgacgatacatatcgaacctattttcacattgcgagt
atctctgtggggccaaagaaaactcagaagtaccagaacctggaaacactttgtcaggaa
tgggagaacccagaatatcccaatatcccactaggggaatatgtatacagaatcaaggtg
gtgtttaagacagatatttatgggaccttccgtcagactctagtcatggactttgggact
gatcccgttctcaggcgagagctacaagtagaatcagctcctatcacggatacagagaag
gtgttcaatgactttctgcaaggcaatcagggaagatggaggaaaaacaatgttcacctg
ctaccgtttgaacctaaacctatacctaacacagccatagaggacaagcttctgagtaaa
tattctctgcctgatattgaaaagttccgttttgaggaccacttgatgcatccacccaca
aaagagacatatcgcatctggatgcatgaaatgttatatgtagaagaatggtctcaactt
gaaagtatatctaggtacagtctgaacacgtccctacagttggtgaaccgtttcctcctg
gtgccgggaatgatatcgggagctaagtatgctcaggatggagaactgttcgcacgcatg
gccttggaggatcgtttgtcagaagattatgctggaggtcgtctcattctcaattctaca
cttgcttggcttacaccacaagaccagaacaagaaagatttgtcttctaatcaaccaagg
gtttatgaagcagtcatagaggacaagggtaaaaacttcatcttccttcgcttgtcaaag
gagtgtgtagaagaacttgacctttcatgtgaccaggaattccctgtacagattcagttc
caactgaatcgtctgccaaagtgtgagatgcatgctgccattgatagacttccaacactt
gatcttgtattcccacctaagaacacgttccctaccacttcatgggtccagggaagtcca
gaattgagtgaagtagtcagtacaaagctgaacgagaaacagagggaggccattttgaag
ataacatctgaaggcaatctttccttgcctcctattcttcttgtgggaccttatggaacc
ggaaaaacctacaccttggcacaagcagctaaacagatccttcagcaggacgatactcgc
atcctcatctgtactcactcaaacagtgctgctgacctgtacatcaaagagtttctccac
ccactggtcaaggagggatacctggaagcacggccactccgtctttacttcagacatcgg
tggatacagactgtcccagaagttgttatccagtactgtatccgggccactgctgggtcc
tcggcaatcttcagatgtcctgtcttcgaggatgtggagaaacacaggattgtcataact
acccttggtacagccaggtacctctgtgaccttgacctagaaccaggatttttcacccac
atattcctggacgaggcagcccaggccatggaaagtgatagtctcatacccctgtctcta
tgtggaccttacactcgtgttgtactggcgggggaccacatgcagctgagtcctgaaata
tactctgacctgggacgacagcaagggttccaaaagtcaatgctggagcgtctacatgag
ttgtacccggatgatgtcccctgtaaagtaatgctgtgtgaaaattaccgatcacattca
gcaatcatcgacttcacctccgacttgttttacgacagtcagctaacagccagcagtgag
cagccctgtcatcccctctactaccctctcaccttctactctgcccgcggtgaagaggtc
cagcatgaaaacagtatcggtttctacaacattgctgaggtacatgaagtgattgaccgt
gtggatcatcttgtaagaacatggccaagctcagagtggggcgagttaggggagggctca
atcggagtgctcaccccttatactgaccaggtgttccacatccgatcagagttacggaaa
aggaaaatgtacaatatcaaagtggaaagggtgtttaatgtacaaggaaagcagttccgc
gtagtgattctgtcgactgtacgcactcgtcacagctgtagcgccgacactatacaggag
gatgttgtcaattatggcttcctgtccgatatcaagctcctcaacactgccatcacccgt
gctcaatcccttgtcatggtgattggggatccagtctctctctgtcttgttggcaagagc
cggaaaatttgggagtactatttagaaatctgtcaggataacaacagtttatttggtaca
acctggacccagctgaaggctcagctgacctcggcagacatgaggaagacgttcattctc
aatccacttgcccctgagtttgtacccaatagactttttcatgctatagcaccagatatt
gcccagcaaggagcttcaggctcaccaaccagttaccatggtgccgctcagcacccgcag
tattacatgggtccaagggtaacatatccggggcagcagttagctcatcaacagatgttt
cctcatccgtatatgccggtaccttacccaggtctcattcctcatgttgtatacaacaga
cagggtgttccccacatcctcggctctccagcacaaggtagagctcctgtacgaggctat
cacccacgtcatgcatctccactggccatccccaaggtcaggccaggagataaggacaag
gtcaaggttgacccctcacaacctgatgtcattatacctggaaagaaattgccatcaatg
acccaacgtggacggcagataatgtatatgcctcagcgtatgtcagcagcctgtcaacag
atgtacttctacccacaacactatgggggatacttctacatgccggaagacccccgagtt
ctaatcaaccagcagctcccacggggaccagtgttacatccccttggaccacagcatccc
agtcagttttacccaatcctacgtccacattatgcccccgtggggctggatgatgcagaa
gacaagcgcagctctcagacatcctctcctgtatcctctcaaggtcgttccggatcacca
gccacatctccaggttcatcagttgcaagtcaacagattcagctccttccaaatgtccgt
catgtgccgattcatctgttcccacgaacagccaccccaacaaacagttcccgtccaagt
acaccacaacggacagaatcgccacaagtctcacaagacatgggtaccaccatcgatcct
aaagcatcacagaaaattgaagcaggttacctaaaatcctcaagtccagcattggagcac
caagagagaagaggatctgcaaatagccctcttgcgagggtgattgcatctgctcaaagg
caggttcctacaactgctgatagtggactggtgttgtctactccctacagtagtggattt
ggtgatatgattatgcctggtcaaaatggagatatgaatgatgtagtaaagaaagaaaaa
acgaagcgaactcctgtcggacttcggctagagacaggatttagtcgacagtttagtgaa
gacttggaaaccccaacagaaattacagacttggtgaagatgatcgacgagacaattgaa
gaagggcatgaatcagctgaagaggaagaacaatggaacagacagtcaaaatcagagagc
agcacgtttttcagttcccgtactactaagaccatggccgctacacgtaaacttcatttg
aatattcctcaacagtcctcaacagaaacctcggaatcatctggatcacccccttctagt
cctcctggttcagatcaaaaaccaacatacgctggcatgctacgtcgtcgacttcctgca
gctacaaatgacattgatccaaatcttctagaaccacagacaccacacactcctgctggc
tttatctcgccgggaactgatatcgatacagacccactggggattttgagaaacctgaac
atcaatgcttcaactgaaaaacagagaacttacaagtatttctcatag
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integrated database retrieval system
