KEGG   Pecten maximus (king scallop): 117330760
Entry
117330760         CDS       T07399                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
pmax  Pecten maximus (king scallop)
Pathway
pmax03013  Nucleocytoplasmic transport
pmax04141  Protein processing in endoplasmic reticulum
pmax04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:pmax00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117330760
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117330760
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    117330760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmax03019]
    117330760
   04131 Membrane trafficking [BR:pmax04131]
    117330760
Messenger RNA biogenesis [BR:pmax03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     117330760
Membrane trafficking [BR:pmax04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    117330760
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    117330760
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    117330760
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd WD40_Gbeta ANAPC4_WD40 WDR55 EIF3I Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD40_RFWD3
Other DBs
NCBI-GeneID: 117330760
NCBI-ProteinID: XP_033745129
LinkDB
Position
7:complement(37665699..37682955)
AA seq 315 aa
MVSVINSVDTAHEDMIHDAQLDYYGTKLATCSSDRTIKIFDVKSGQQTLVSELRGHDGPV
WQLAWAHPMFGNLLASCGYDKKVIIWKESNGTWGKLYEYPNHDSSVNSVQFAPHEFGLIL
ACGSSDGSISVISSAGDGAWDAKKINNAHSIGCNAVSWAPSITPGALLDQSVRQQAVKRL
ASGGCDNLVKIWREEDGQWKEDQKLEGHSDWVRDVAWAPSIGLPKSILASCSQDFRVLIW
TNDGTSSDWTSKTLNKFNDVVWHLSWSITGNILAVSGGDNKVSLWKETLEGQWVCISDVT
KGQGQVADSQKGSSS
NT seq 948 nt   +upstreamnt  +downstreamnt
atggtgtctgttattaattcagtcgatacagctcatgaggacatgattcatgatgctcag
ttagactactatggaacaaaactggccacctgttcatcagaccggacaataaaaatattt
gatgtgaagagcggacaacagactcttgtatcagaactgagaggtcacgatggtccagtt
tggcagcttgcctgggcgcatccaatgtttgggaatctgttggcatcgtgtggttacgac
aagaaagttatcatatggaaggagagcaatggaacctggggaaaactctatgaatatcct
aatcacgactcgtcagtaaattcggtacaatttgctccccatgaatttggtctcatactg
gcatgtggtagctcagatgggtctatctcagtaatatccagtgcaggtgatggagcttgg
gatgccaagaaaataaacaatgcccattctattggttgtaatgctgtgagctgggcacca
tctataactcctggggcactcctagatcaatccgtacgtcagcaggctgtcaagcgactt
gcatccggaggatgtgacaaccttgtcaagatttggagggaagaggacggccagtggaag
gaagatcagaagctagagggacacagcgattgggtgagggatgtcgcctgggcaccctcc
ataggtctaccgaaaagtatcctggctagttgttctcaggatttccgtgttcttatctgg
actaacgatgggacgagtagtgattggacgtcaaaaactctaaataagttcaacgacgtc
gtatggcatctgagttggtcgatcacagggaacattttagccgtgtcaggaggtgacaac
aaggtaagcttatggaaggagacactagaaggacagtgggtgtgcattagtgatgtaaca
aaaggtcaaggtcaagttgcagacagtcaaaagggatcctcaagctga

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