Pecten maximus (king scallop): 117331669
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Entry
117331669 CDS
T07399
Name
(RefSeq) regulator of nonsense transcripts 2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03013
Nucleocytoplasmic transport
pmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117331669
03015 mRNA surveillance pathway
117331669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117331669
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117331669
mRNA cycle factors
P-body specific factors
117331669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
117331669
NCBI-ProteinID:
XP_033746389
LinkDB
All DBs
Position
7:13455566..13497804
Genome browser
AA seq
1404 aa
AA seq
DB search
MSEKEGTEKKEENGFKHSSGARAKQSNEGRASNKAHDERVTAKGTKSSTPGTPNKGGKND
SRKTGSGGHDNVRETNRNRNNSQYDRSGYRTSERGSDRGNDRDGGARGGKSGNRGGGDGG
SREKSGNSSRGSGRGATGGTNREREHTPRKSDVRDRREDRGEKGDGRESQKKSSSSKAQM
SSAADLEAQWLKEEEDKRKKEEEEERIRLEEIRKKEEEEKRKEEEAQRLKEEEIKCIQDY
ITECKERTESKKLLKEQNLAAADQRPDERFFTKLDSNLKKNTAFVKKLKNLTESQKEMLT
REFHGLNLTKYVGEVAAAITEAKLKMSDIHCAVHISSIMFQRYHEFPAALLENIQKFLLG
KKDDKISNPSKYRVDLRFFAELVSVGLFSKKEGLAVVGKQLEQLVNNDHEEHNNLAILSS
FCKHCGDDYMGLVSRKYRLLAEKYSLEIPVSQMLQREKQKACRNLMKDYFLSLCKHLIRV
YKDLKNIERHNRRTLQTKGELSNERRESYENALAAYQKLHGNTSVYSDLLDEDMPDLPEE
DLLKDEESGFDVFDPSKNAEFQYVGDSTLFEDEDARAFYESLPDLRAFIPGICYKESEQS
TVKDETKDVETGLEEDMENLKVEDVEREMETEQQIAEVENKEAEEEAAKVKDQEEEVVPA
AEEDYSALHDLDIEDDADTGNLMKVQFDAYLLSLPNCVNRDLLDKASIEFCMNFNNKANR
KKLVKALFTVHRTRYDLLPFYSRMVATLYPCMPDVANDLVQLLKGDFKWHVRKKDQINIE
SKLKTVRFIGELVKFKLYPKSEALHCVKSLMFDFTHHNIEMACSLLETCGRFLYRSQDSH
HRTKIYLDVMMRKKAALHLDSRYTTMIENAFYYSNPPDVPQTTRKVRPPLHEYIRKLLYK
DLSKVTTEKVLRQMRKLNWDDHEIAFYATKSLIAVWNVRYNSIHCAANLLAGLAPYHEHV
AIQVVDGVLEDIRIGMEVNHPKYNQRRVSCAKFLGELYNYRMVESTVIFKTLYSFITFGV
SFENDQSLLDPPEHLFRIRLTCVVLETCGQYFDKGSSKKKLDCFLIYFQRYYWFKRQCCI
WTEDRPFPIDVENLMQDTIEAIRPKTQVPQNYEEASKAAEDLENEYKQKLASVLPIIDTD
EGNSSEADEGGLTTIQETEEMDDFSNSLSNTEDDSETSGDDRSQSQRSHTGSMGNRDQGE
EGEGVEMSENDEDVMLDSDGEDDEITLLTGGPRFVKCSEDDDFMTAFDKMMTDNIQARNQ
ESLKVPQLDIAVPMHLRDKNKKAACSNFLDQSQEEPKENKSIDFVLMTRKGNKQQFTNLN
VPISAEFAAKYKEREHAEKMEKERMKQVVLGIHERQEEEDYQEMIAALNRPMPLVNANRD
RRLRNYQHPKGAPDADLIFGSKKR
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaggagggcactgagaagaaggaagagaatggatttaaacactcctcaggt
gctagagctaagcagagcaatgaaggcagagctagcaacaaagcacatgatgagcgtgtg
acagccaaaggcacaaagtctagtacaccaggaaccccaaataagggcggcaagaatgac
agcaggaagacagggtcaggtggccatgacaatgtgagggagacaaatcgtaatcgaaac
aattctcagtatgaccgcagtggctatcgaaccagtgaacgaggatcagatagagggaat
gatcgtgacggtggtgcccgaggagggaagagtgggaataggggaggaggagatggaggc
agcagagaaaagagtggcaacagctccagagggagtggtaggggtgcaactggaggtacc
aacagagaaagagaacacacaccaaggaaatctgatgtgagggacagaagagaagacaga
ggagagaaaggagatggcagggaaagccaaaagaaatcttcatcatcaaaagctcagatg
agctcagcagcagatctagaagctcagtggctgaaggaggaagaagataaaagaaagaaa
gaggaggaagaagaaagaatcagacttgaggaaatcagaaaaaaggaagaggaggaaaaa
aggaaagaagaagaagcccagcgactgaaggaagaagaaattaaatgcattcaagactat
ataactgaatgtaaggaaaggacagagagtaaaaaactactgaaagaacagaatctggct
gcagcagatcaaagaccagatgaaaggttttttacgaagcttgattcaaacttgaagaaa
aacactgcttttgtaaagaaattgaaaaatctgacagaatcccaaaaagaaatgttgaca
agagagttccacggccttaatctaacaaaatatgttggtgaagtggctgcggccatcact
gaagctaaactgaagatgtcagatattcattgtgcagttcacatcagtagcatcatgttc
caacgttaccatgaatttcctgctgctctgctggaaaacatacagaagtttcttctggga
aagaaggatgataagatcagcaaccccagtaaatatcgtgtagacctgcgattttttgcg
gagttggtgtctgtcggactattctccaagaaggagggtttggctgtggtgggaaaacag
ttagagcagcttgtaaacaatgaccatgaagaacacaataatctggccatcctgtccagt
ttctgtaaacactgtggtgatgactacatggggttagtctccaggaagtacagattactt
gctgaaaagtattcacttgaaataccagtaagtcagatgctgcagcgcgagaagcaaaag
gcctgtcgaaatctcatgaaggactacttcctgtctctgtgtaaacatctgatacgagtg
tataaagacctgaaaaacatagagcgacacaatcgcaggactcttcagacaaagggagag
ctgagcaatgagagacgagagagctatgaaaatgcattagctgcttatcaaaagcttcat
ggcaacacgtctgtgtattcagatttgttggatgaagacatgccagacttaccagaggaa
gatctgttaaaagatgaggaatctgggtttgatgtgtttgacccttcaaagaatgcagag
tttcagtatgtcggcgacagtacactgtttgaggatgaggatgcaagagcattctacgaa
tccctgcccgatctcagagcttttataccagggatttgttataaagagagtgaacagagc
actgtcaaggatgaaaccaaagatgtggaaactggtttggaggaagacatggagaatctt
aaagtggaagacgtggagcgagaaatggagacagaacagcagatcgcagaggtggagaat
aaagaagcagaggaggaggctgcaaaggtcaaagatcaggaggaagaggtggtacctgct
gcagaagaggattacagtgctcttcatgatctggacattgaagatgatgcagatactggc
aatctgatgaaggtgcagtttgatgcttacctcctctccctcccaaactgtgttaacagg
gacctactggacaaagccagcatagagttctgtatgaatttcaacaataaagccaacagg
aagaagctggtgaaagcgttgttcactgttcacagaaccaggtatgacttgctgccattt
tactctcggatggtggccacactgtatccttgcatgcctgatgtggcgaacgaccttgtt
cagcttctcaaaggagacttcaaatggcatgttaggaaaaaggaccagatcaacattgaa
tccaagttaaaaactgtgaggtttattggagagctggtgaagttcaagttatatcctaag
tcagaggcactgcattgtgtaaagtcactaatgtttgatttcactcatcacaacattgag
atggcctgctctctactggaaacatgtggaaggtttctctacagatctcaagattctcat
caccggacaaagatatatctggacgtgatgatgaggaaaaaggcagcccttcacttagac
agtcggtacacaacgatgatagagaatgccttctactacagtaaccctccagacgttccc
cagaccaccaggaaggtcaggcctcctctccatgagtacatcaggaaacttctctacaaa
gacctctcaaaggtcaccacagaaaaggttctgaggcaaatgaggaagttaaattgggat
gatcatgagatagcattctatgccacgaagtcattgatagcggtatggaatgtacgttac
aactctatacactgtgcagccaaccttctagctggtctagctccctatcatgaacatgtg
gccatacaagtggtggacggagtactggaggacatcaggataggcatggaggtaaaccac
cccaagtacaaccagcgacgcgtgagctgtgctaaatttcttggagagctgtataactac
agaatggtggaatctaccgtcatcttcaaaactctgtactccttcatcacttttggagtg
tcctttgaaaatgatcagtcacttctggatcccccggagcatctgttccgtatccgcctc
acctgtgtggtacttgagacatgtggacagtattttgacaagggttcaagcaaaaagaag
cttgattgcttccttatctacttccagcggtattactggttcaaaaggcaatgctgtatt
tggactgaggacaggccattccccattgatgtggaaaacttgatgcaggacacgattgaa
gccatacgccctaagacccaggtaccacagaactatgaagaggctagcaaagctgctgaa
gacttggagaatgaatacaaacagaagctggcatctgttctgcccatcattgacacggac
gagggaaacagtagtgaagcagatgaggggggtctgaccaccatacaggagacagaggaa
atggatgattttagtaacagtctgtccaacactgaggatgatagtgagacgagcggggat
gaccgaagtcagagtcagcgaagtcataccggcagtatgggcaatcgggatcaaggggag
gagggcgagggtgttgaaatgagtgaaaatgatgaagatgtcatgctggactctgacggg
gaagatgatgagattaccctgttaactggaggtccaagatttgtcaagtgttcagaggac
gatgactttatgacagcttttgacaagatgatgacagacaacattcaggcaagaaatcaa
gagtcactcaaagtgccacagctggatatagcagtcccaatgcatctgagggataaaaac
aaaaaggcagcatgctctaacttcttagatcagagtcaggaggagccaaaggagaataag
tccatagactttgtactgatgaccaggaaaggcaacaaacagcagttcaccaacctgaat
gtaccaatatctgcagaatttgcagccaagtataaggaaagggaacatgcagagaagatg
gagaaagagaggatgaaacaggtggtactgggaatccatgagcgtcaggaggaggaggat
taccaggaaatgattgcagctttaaacagaccaatgcctttggtgaatgctaatcgtgat
aggaggctgaggaactatcagcacccaaagggggctccagatgctgatctcatatttggc
tcaaagaaacgttga
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